| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2125 |
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| Symbol | |
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| ID | 6282960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 2398280 |
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| End bp | 2399893 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642621684 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_001895750 |
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| Protein GI | 187924108 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACCG TCAACGCACC GATAACTGGA ACAGGAGAAG TGAAGTTCGC GCCATCGTCG
GCGGCGGTCT CAGCGGTTCC AGTACAGCAA ACGCCGAGCG AAGCGACACT GCCGCTGCGT
CTGGCAATCG GCCTGCTCGG CATGTTGCTG GCATCACTGC TCGCCATATT GAACGAACAG
GTCACCGCGG TTGCACTCGC CGATATCCGC GGCGCGTTTT CAATCGGACG TGACGACGGG
ACATGGCTGA CCACCCTCTT CGAGGCGACC AACGTGGCCA CGATGGTATT CGCGCCGTGG
TTCGGCGTGA CGTTCACGCT CAAACGCTTC ACGATCGGCG CCGTGCTCGC CGTGATGGTG
CTTGGATTGC TCTGCCCGTT TGCGCCTAAC CTGCTGACGC TCTACGTATT GCGCGCGCTG
CAGGGCGTCG CCGGCGGATG TCTGCCGCCC ATGCTGATCA TCGTGGCACT GCGTTACCTG
CCCCCGAAGG TCAAGTTATA CGGGCTCGCC GGCTATGCAC TGACCGCCAC CTTCGGACCC
GCGCTCGGCA CGCCGCTCGC CGCGTTATGG ACGGAATACG TCGGCTGGCA AATGGCATTC
TGGCAAATCG TGCCGCTCGG ACTCATCAGC TGCGTGGCAA TCTACAGGGG ACTGCCGGCG
GACCCCACCC GACTCGAACG GCTGCGTTCA TTCAACTGGA CCGGTTTCAT ACTCGGTTAT
CCGGCCATCG CCATGCTCGT GATCGGCCTG CTGCAGGGCG ATCGCCTCGA CTGGCTGAAC
TCCACGTTTA TCGCCACGAT GTTTGGCGGC GGCACGTTGT TGCTGGTGGC GTTCCTGATC
AACGAATGGT TTCATCCGCT GCCGTTTTTC AAACTCCAGC TGCTTGCCCG CAGGAACTTC
GCGCATGGAC TGCTGACCCT GGTGGGCGCG GTGACGCTGC TGGTCGGTGT CGCCGCCATA
CCCGGCCAGT ATCTCGCGCA GATTCACGGC TACAGGCCGC TGCAAACCAC GCCGCTGTTT
CTGCTGGTGG CCATTCCCCT GCTGGTTTCG CTCCCGGCGA CCGCCGCGCT GCTCAATCTG
CGGCAGGTCG ACCACCGTTG GGTGATGGCG ATTGGACTTT GCCTGATGGC GATCTCGTGC
TTTCTCGGCA GTTTCGTGAC CACGGACTGG GTTCGCGAGA ACTTCTACTG GCTGCAGTCG
CTACAGATCC TGGCGCAGCC GATGATCATC ATGGGCATCC TGATGGGCGT CACGACCGGC
TTGCCGCCGA CTGAAGGCCC GTTTGCTTCG GCCATGTTCA ACACCATCAA AACACTGTCC
GGCGCCGCGG CCACCGGCCT CATCGAAGGT CTGGGCACCG CGCGCGAGCA TTTTCATTCG
GCCATGCTGG TGGACCATCT GGGCAACAAC GCGCTGGTCA CGAGCCAGAG CATCGATGCC
GCTCACGGGC TCGGCGAACT CGCGCACCGG CTCCACGAGC AGGCCGTCGT GCTCACGTCG
GCGGATCTCT ATCGCGTGAT GGCCGGTATC GCCGTCGCCT TTCTCTTCGT TATTCCGGTG
TTGCCCGTGC GGGTCTATCC GCCGTGGAGC ACAACGCAGC CCTCTTCACG TTAA
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| Protein sequence | MNTVNAPITG TGEVKFAPSS AAVSAVPVQQ TPSEATLPLR LAIGLLGMLL ASLLAILNEQ
VTAVALADIR GAFSIGRDDG TWLTTLFEAT NVATMVFAPW FGVTFTLKRF TIGAVLAVMV
LGLLCPFAPN LLTLYVLRAL QGVAGGCLPP MLIIVALRYL PPKVKLYGLA GYALTATFGP
ALGTPLAALW TEYVGWQMAF WQIVPLGLIS CVAIYRGLPA DPTRLERLRS FNWTGFILGY
PAIAMLVIGL LQGDRLDWLN STFIATMFGG GTLLLVAFLI NEWFHPLPFF KLQLLARRNF
AHGLLTLVGA VTLLVGVAAI PGQYLAQIHG YRPLQTTPLF LLVAIPLLVS LPATAALLNL
RQVDHRWVMA IGLCLMAISC FLGSFVTTDW VRENFYWLQS LQILAQPMII MGILMGVTTG
LPPTEGPFAS AMFNTIKTLS GAAATGLIEG LGTAREHFHS AMLVDHLGNN ALVTSQSIDA
AHGLGELAHR LHEQAVVLTS ADLYRVMAGI AVAFLFVIPV LPVRVYPPWS TTQPSSR
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