Gene Bphyt_2098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2098 
Symbol 
ID6283331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2363516 
End bp2364388 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content67% 
IMG OID642621658 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001895724 
Protein GI187924082 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTCT TCAAGCGTTC CAGTCAGCCC GAAAAGTCCG CTGGCGCAGC CTGCGATTGC 
AGCGCGCCTG CTTCCTTCCG GCGCGCGGCC CAGCCGCGCC GCCCGTTACT GACACGCGTC
GATTGGCGCG GCGCCGTCCT GCCCGTTGTC GCGATCGTGA TCTGGTGGGC CGTCTCGGCA
GCGCACGTGG GCAAAAGCGG ATTGCTCGTC AGCCCGGCGC AGGTTCTCGC CACCGCGTGG
CAGCAGATCG AGAGCGGCGC GCTGTTGAAA GCGCTCTCGG CGTCGCTCGC GCGCGAGGCG
AGCGGCTTCG TGATCGGTAC GCTGGGCGGC CTGCTGCTCG GCAGCGTGCT CGGTTTCTCG
CGGCTCGCCA CACGCATGAT CGGGCCGAGC TTCGACACCT TCAAACAGAT CTCGCTGTTT
GCGTGGATCC CGTTGATTTC CGTGTGGTTC GGTCTGGGCG ACGTGGCAAA AGTCGTGTTC
CTCTCGCTCG CCGCGCTTCT GCCCGTCACC GCGCACACTT GCGACGGCAT CCACGCGGTG
CCGCGCGCGT ATATCGAAGT CTCGCGCGCC TTCCGTTACT CGCGATGGCA GCTCATCCGC
GCCGTGATTC TGCCGGCCGC GCTGCCGTCG ATTTTCACCG GCATCTATCT CGCCTTGATC
TATTCGTGGC TCGCCACGCT CGGCGCCGAA TATCTGCTGG TGGCCGGCAG CGGCATCGGC
AACACGCTGA TCGACGGCAG CGAGCAGTTC CGCATGGATC TGGTGCTGTT CGGCGTGATC
GTGATCGGCG TGACCGGCTG GGCGTTGAAC GCGCTGGCGC GCGCCGTGGA GCGGGCAATC
TTTGCGCGCC GGTTCCAGCC GGCCACGCGC TGA
 
Protein sequence
MKLFKRSSQP EKSAGAACDC SAPASFRRAA QPRRPLLTRV DWRGAVLPVV AIVIWWAVSA 
AHVGKSGLLV SPAQVLATAW QQIESGALLK ALSASLAREA SGFVIGTLGG LLLGSVLGFS
RLATRMIGPS FDTFKQISLF AWIPLISVWF GLGDVAKVVF LSLAALLPVT AHTCDGIHAV
PRAYIEVSRA FRYSRWQLIR AVILPAALPS IFTGIYLALI YSWLATLGAE YLLVAGSGIG
NTLIDGSEQF RMDLVLFGVI VIGVTGWALN ALARAVERAI FARRFQPATR