Gene Bphyt_2039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2039 
Symbol 
ID6282155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand+ 
Start bp2305197 
End bp2305787 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content60% 
IMG OID642621604 
Productprotein of unknown function UPF0016 
Protein accessionYP_001895670 
Protein GI187924028 
COG category[S] Function unknown 
COG ID[COG2119] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.589069 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones6 
Fosmid unclonability p-value0.00000000898807 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAATCGT TCCTCGTTTC GACCAGCGTG GTCGGTCTAG CCGAAATCGG CGACAAGACC 
CAACTATTGT CCCTGGTGCT GGCCGCCCGA TATCGCAAAC CCATTCCAAT CATTCTCGGC 
GTCTTTGTCG CAACGCTCAT CAATCATGCT GCGTCCGGTG CTCTGGGCGC ATGGCTTGCC 
AGCGTTCTGA GTCCATCGAT TTTGAACTGG GCAGTCGTCG CGTCATTTGC CGTCATGGCT 
GTGTGGATTC TGATTCCCGA CAAGCTCGAC GGCGCCGAGG CGGTGTCGAC CACGCATCCG 
ATGGGCGTGT TCGGCACCAC GGCGTTGACG TTTTTTCTCG CTGAAATGGG CGACAAGACG 
CAGGTAGTCA CGATCGCGCT GGCCGCGCGG TTTCACGAAT TCTTCGGCGT GGTCGCCGGC 
ACCACGCTTG GCATGATGCT GGCCAACGTG CCCGTCATCT ACCTGGGGCA CAAGTTTGCC 
GACCGTCTGC CGACCAAGGC GGTCCACATT CTGGCCGCGG TCATCTTCGT TGTCCTAGGT 
GGCTTTGCCC TCAGGACGGC GCTGTATCCG CACGAGCACC CACTGTTCTA G
 
Protein sequence
MQSFLVSTSV VGLAEIGDKT QLLSLVLAAR YRKPIPIILG VFVATLINHA ASGALGAWLA 
SVLSPSILNW AVVASFAVMA VWILIPDKLD GAEAVSTTHP MGVFGTTALT FFLAEMGDKT 
QVVTIALAAR FHEFFGVVAG TTLGMMLANV PVIYLGHKFA DRLPTKAVHI LAAVIFVVLG 
GFALRTALYP HEHPLF