| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1919 |
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| Symbol | |
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| ID | 6281294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 2161711 |
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| End bp | 2163003 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642621485 |
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| Product | HipA N-terminal domain protein |
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| Protein accession | YP_001895551 |
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| Protein GI | 187923909 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
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| TIGRFAM ID | [TIGR03071] HipA N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.109564 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.999152 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCTA GAGCGCTAGT CGCCTATGCG AATGGCCGCC GCGTGGGCGT CGTGAGCGAC
GACAGCGGAG TCTGGTCATT TGCCTACGCC GAGGACTGGC TGGCTCGTGA GGACGCGTTT
GCGCTTTCAC CCGCTTTCCC ACTGCTAGCC GAGCCTTTCG CCGACGGATC CAGCCGGCGG
CCGGTGCAAT GGTTCTTCGA CAATCTGCTG CCTGAAGAGG AAATGCGCAG TGCGCTCGCT
CGTGAGGCCA AGGTCGATGC GAGCGACGCG TGGGGTTTGC TCGCCTATTA CGGCCGCGAA
TCGGCCGGCG CCTTGACGCT GCTCGCAGAG GGCGAACAGG AGGCGCCTGG CGGACTGCAG
TCTTTGTCGC GGGCGAATCT GGAGGCGCGC ATTCAGGCGA TGCCGCAACA CGCGCTCACC
GCCACGGCGC CCAAACGCAT GTCCGCCGCA GGCGCCCAAC AGAAGCTGTT GCTGACCTTG
CGAGGCAACG CGCCGGACTA CGAACTGCTC GAGCCCGTGG GCAGTGAACC GTCCATGCAT
CTTCTCAAGC CCGACATGCG CAGCACAGGC TATCCGCATT CGGCGATCAA CGAATTTTTC
TGCATGCAAC TCGCGCGTGC AATGGGTGTG CGCGTACCGC CCACGCATTT TTTGCGGGTG
CCTTCGGCCT GTTACGTGAT CGATCGCTTC GACCGTGACA CGAGCAGTGA GCCGGCTGGG
CGGCTGCATA CTGTCGACGC CATGCAATTG TTGAATTACG ACCGCAGCTT CAAATATCGG
AATGCGACCG CGCAGGTGCT CAGGGATGCG ATCGAGAAAA CGAGCACGCG GGCCGTGGCG
CGTCTCGATG TATTCCGCTG GGCGATCTTC AATGTGCTCA TCGGCAATGC CGACTCACAC
CTGAAAAACC TCTCGTTCTT CGTTACCGCT CGCGGTTACA GGCTGGCGCC GTTCTACGAT
CTGGTGAGCA CGGTCGTCTA CCACACGCCG ACCTATCAGC CACAGCAGCG GGACCGTTGG
CCGCACTGCG ACCTGACCAT GCCGGTCGGA GACGCCACTC AATTCGCGCA GATCAACAGA
AAGAACATGC TCGCCTTCGG CGAAGCGCTT CGTCTTTCGC CTAAGGGTTC GGAAAGATTG
CTGGATGAGA TGCTGGCCAC GCTCGACGCC CGCGTGGCGG ACACCCGCCG CAGCGTCGAC
GAAATCGCGC AGCCGAATGC CGGCGAGGTC CGCCTGCTCG ATTCGATCGT TGCGATGCCG
CTTGCGGAAA TGAGCCGCGC TTTGCGCAAG TGA
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| Protein sequence | MAARALVAYA NGRRVGVVSD DSGVWSFAYA EDWLAREDAF ALSPAFPLLA EPFADGSSRR
PVQWFFDNLL PEEEMRSALA REAKVDASDA WGLLAYYGRE SAGALTLLAE GEQEAPGGLQ
SLSRANLEAR IQAMPQHALT ATAPKRMSAA GAQQKLLLTL RGNAPDYELL EPVGSEPSMH
LLKPDMRSTG YPHSAINEFF CMQLARAMGV RVPPTHFLRV PSACYVIDRF DRDTSSEPAG
RLHTVDAMQL LNYDRSFKYR NATAQVLRDA IEKTSTRAVA RLDVFRWAIF NVLIGNADSH
LKNLSFFVTA RGYRLAPFYD LVSTVVYHTP TYQPQQRDRW PHCDLTMPVG DATQFAQINR
KNMLAFGEAL RLSPKGSERL LDEMLATLDA RVADTRRSVD EIAQPNAGEV RLLDSIVAMP
LAEMSRALRK
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