Gene Bphyt_1918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1918 
Symbol 
ID6281293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2161437 
End bp2161721 
Gene Length285 bp 
Protein Length94 aa 
Translation table11 
GC content62% 
IMG OID642621484 
Producttranscriptional regulator, XRE family 
Protein accessionYP_001895550 
Protein GI187923908 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0543598 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.812558 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTCCA ACGTTTTCAT CAGCAACATG ACGGAGTTAG GCGATCTCGT GCGGGCGTCC 
AGGCTTGCGC AGAGGTTGAC GCGCGACGAC GTCGCCACCG CCACCGGCCT GTCTCCCAAG
TTCATCACGC ACATCGAGGC AGGTAAGCCA ACGGCGCAGA TCGGCAAGGT GCTGCATCTC
CTCAGCGAAC TGGGCATCAC GCTGCGCGCC GAGGTTTCCG TAGACATTCC AGCAGACGTC
TCCACCAAGG CATCCCATCG CCGCCGGAGT ACCCATGGCC GCTAG
 
Protein sequence
MESNVFISNM TELGDLVRAS RLAQRLTRDD VATATGLSPK FITHIEAGKP TAQIGKVLHL 
LSELGITLRA EVSVDIPADV STKASHRRRS THGR