| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1916 |
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| Symbol | |
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| ID | 6281291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2155295 |
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| End bp | 2156593 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642621482 |
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| Product | D-amino-acid dehydrogenase |
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| Protein accession | YP_001895548 |
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| Protein GI | 187923906 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.346956 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGTCA TCGTCATCGG CGGCGGGATC GCGGGCGTCG CCACCGCTTA TCAACTGCGC
GCGGCCGGCC ATCGGGTATG CGTCGTCGAG CGCCACGCCA CGGTCGCGCA GGGCGCAACC
TATGGACACG GCGGCACCGT CCTGCCGACC CCGCTCGACG TCTGGTTCGG CCCGACTTTC
ATGGCCAGCC GTCAAAACGC CAGAAACGGC GTCGTCAACA AGGCCGGCTT CAACGGATCG
GCGCGCCAGT TCGTCAAGCA GCTCGCCGAG TTGCAGGAAC CCAACGCGTT CGGTCATCAA
TACGGCCTGC TGCGACCGCT GATCGAGCTG TCGCGCGACA CCATGGCGGA CATGGAGGCG
CGCTTCGGCC TCGAGTTCGA ACAGACCAGC GGCCTGCTCT ATCTGGTGCG CTCCGAACAG
GAATGGGAGC AGCTGCGGCC CGCGCGCGGC CTGCTGCAGC TTTTCGAAGT GCCGCATCAC
GAACTGACCC CCGAACAATG TGCCGCGTTC GAGCACTCCG TGCGCACCGA GCCGGAATTC
GCGGGCGGCG TGCTGTTCGA CCAGGAGCGC ACGGCCAATG CGCCGCTCTT CACCAAGCTG
ATCAAGCAGA CGCTGGATAC GCAGGGCGGC GTGCAATTCA TGCTGGGCTG CGAAGTCTCG
TCGATCCGAC TGGACGGCCA GCGCGCCTCG GTGGAACTGG CGCCGCAGCC GGGCGCGAGC
TCCCGTTCGC GCGAAGTCGA CGTGATCCAC GCCGACGCGG TGGTCGTGGC CGCCGGCCAT
GGCAGCCTGC CGCTGCTCGA GAGGCTCGGC CTGCGCTTGC CGCTGCATCC GCTGCGCCTG
CACACACTGG TCGCGCCGAT CGCGCATGAG GAATGCGCGC CGCACGTCGC CATCGTGGAC
GCGGTGAAGC GGATCGCGAT CAGCCGCATG AACCATCGCT TGCGGATTGC GGGCGGCGCG
GTGCTGCAAA GCGCCGGCCA GATCGACAAG CCGTTGGGCG AAGCGGTGAC GAAAGAAGCC
CTCGCGCTGC TTGGTCAGGC CACGCACGAC TGGATTCCGG GCGCCGCGCG AATCTCGGTG
GCATTGCCGT GGGAAGGCGT CAAACTGCTG TCGCCGGACG GCTTGCCGGT AATCGGCAAC
GCACTGCATC CGCGCCTTTT CGTCAATGCG GGCCACGGAC CGGCCGGCTG GGGTCTCGCC
TGCGGGTCGG GCAAACTGGT GGCCGACCTG ATTTCGGGCG GCACGCCGGA CGTTCCTGTA
GACACACTGG CCGCGCTGCG CCCGGACCGG TTCAAGTAA
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| Protein sequence | MDVIVIGGGI AGVATAYQLR AAGHRVCVVE RHATVAQGAT YGHGGTVLPT PLDVWFGPTF
MASRQNARNG VVNKAGFNGS ARQFVKQLAE LQEPNAFGHQ YGLLRPLIEL SRDTMADMEA
RFGLEFEQTS GLLYLVRSEQ EWEQLRPARG LLQLFEVPHH ELTPEQCAAF EHSVRTEPEF
AGGVLFDQER TANAPLFTKL IKQTLDTQGG VQFMLGCEVS SIRLDGQRAS VELAPQPGAS
SRSREVDVIH ADAVVVAAGH GSLPLLERLG LRLPLHPLRL HTLVAPIAHE ECAPHVAIVD
AVKRIAISRM NHRLRIAGGA VLQSAGQIDK PLGEAVTKEA LALLGQATHD WIPGAARISV
ALPWEGVKLL SPDGLPVIGN ALHPRLFVNA GHGPAGWGLA CGSGKLVADL ISGGTPDVPV
DTLAALRPDR FK
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