| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1899 |
|---|
| Symbol | |
|---|
| ID | 6283664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 2131868 |
|---|
| End bp | 2132548 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642621463 |
|---|
| Product | Carboxylesterase |
|---|
| Protein accession | YP_001895531 |
|---|
| Protein GI | 187923889 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0400] Predicted esterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0365567 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.41049 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAGC AACCGCCCAC CATTGAAATT GAAAGCGCGC CGAATCCAAG CTTCGCCGTG
ATCCTGATGC ACGGTCTCGG CGCCGACGCC AACGACTTCG TGCCGCTCGT GCCCGAACTG
CGTCTCGGCA ATGCGCCTGG CGTGCGCTTC GTGTTTCCCA ATGCGCCGGA GATTGCCGTT
ACGGCGAACA ACGGCTACGT GATGCGCGCG TGGTACGACA TCCGCTCGTT TCAGAACATC
AATGAGCAGA TCGACGAAGC GGGTATCGAA GCGTCTTGCG CAACCGTGCG GCAATTGATC
GAGGCGCAGA ACCGGCGCGG CATTCCGACT TCGAACATCT TTCTCGCGGG GTTTTCGCAA
GGCGGGGCGA TGACCTATTC GGCAGGGCTG ACGCACCCCG AGACACTGGC CGGCTTGATC
GTGATGTCGG GGTATGTGCC GTCGCCGGGC TTTATCGACA GCCGTTTGAG CGCCGCGAAC
CGTGGCACGC CTATCTTCGC CGCGCATGGC ATGTACGACG ACGTGTTGCC GATCCAGCTA
GGAGAGGCCG CGCGCGACTT TGCGATCGCG CGCGGTTGCA AGGTGGACTG GAGTGCGTAT
CCGATGCCGC ATTCGGTGTG CGCGGAGGAG ATATCGGCGC TGCGCGCCTG GCTCGGCGCG
CTGCTCGCGG CGTCTTCCTG A
|
|---|
| Protein sequence | MTEQPPTIEI ESAPNPSFAV ILMHGLGADA NDFVPLVPEL RLGNAPGVRF VFPNAPEIAV
TANNGYVMRA WYDIRSFQNI NEQIDEAGIE ASCATVRQLI EAQNRRGIPT SNIFLAGFSQ
GGAMTYSAGL THPETLAGLI VMSGYVPSPG FIDSRLSAAN RGTPIFAAHG MYDDVLPIQL
GEAARDFAIA RGCKVDWSAY PMPHSVCAEE ISALRAWLGA LLAASS
|
|---|
| |