| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1818 |
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| Symbol | |
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| ID | 6284217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2039518 |
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| End bp | 2040897 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642621381 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001895450 |
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| Protein GI | 187923808 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.138431 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGCCG ACGTACGGAA AATCGCCGGC CTCGCCTGGC CGGTGCTGAT CGGCCAGTTG
GCGATCATCG CGTTCGGCGT GATCGACACG GCGATGGTCG GCCGTTACTC CGCTGTGGAT
CTGGCCGCGC TCGGCCTCGG CTCGTCGATC TATATCTCCG TGTATATCGG GCTGACCGGC
ATTCTGACCG CGCTGCAACC GATTACCGCG CAACTTTACG GCGCGCGCCG CTACATCGAG
ATCGGCGAGG AAGTTCGCCA GGCCTTGTGG CTGGCGCTGG CGCTGACCGT GATCGGCTTC
CTGATCCTGT TCTTCCCGGG CCCCGTGTTG CAGGTCGCGC GCGTGCCCGA GGCGCTGCAC
GAGCGCACCG TCGCGTACCT GCGGATTCTG GCTTTCGGCT TGCCGGCCGG CCTCGCTTTT
CGGGTCTACA GTTCGGTCAC CAACGCGGTC GGCAAGCCGC GGCTCGTGAT GATTCTGCAG
ATCGGCGCGC TGCTGCTCAA GGTGCCGCTC AATACGTGGT TCATCTTCGG CGGATTCGGC
GTGCCGGCGC TCGGCGGGCC GGGTTGCGCG CTCGCCAGCA CCATGATCAA CTGGGCGCTG
GCCGCGCTCG GCATGCTGCT GCTGACGCGT GTCGAAGTGT TCATGCCGTT CGCGATCTTC
AGCCAGTTCT GCTGGCCGGT CTGGCGGCGC CAGGCGGCGC AACTGCGGCT GGGCATTCCG
ATGGGCCTGT CGTATCTGAT CGAAGTCACC TCCTACACGT TCATGGCGCT CTTCATTGCG
CGCTTCGGCA CGACGACGCT CGCCGGCCAC CAGATCGCCG GCAATATCGG CGCGGTGCTG
TACATGACGC CGCTGTCGAT CGGCATCGCT TCGTCGACGC TGGTCGCGCA AGCGCTCGGC
GCGCATCGTC CGGAAGCGGC GCGCACGCTG TCGCGTCACG GCATCATGAT GGCGATGGCG
ATTGCCTGCT GTTACGGCGC GATCGTGCTG GTGCTGCGGC CGTACATCAT CGAAGGCTAT
ACGCCGAATG CGCAGGTCGT GACGGCGGCG TTGCCGCTGG TGTTGATCGT CGTGTGCTAT
CACCTGTTCG ATGCCTTGCA GATCACCACT GCGTTCGTGC TGCGCGCCTA CAAGGTGGCG
GTCGTGCCGA CCGTAATCTA CGCGGTGGCG TTGTGGGGCG TGGGGCTCGG CGGGGGTTAT
GTACTCGGTT TCAACGTGAC CGGCGGCACG CCGGAATGGC TGACCGGCGC GCGTGGCTTC
TGGGTGGCGA ATACCGCGAG TCTGGCGATT GCGGGCGTTG GCTTGCTGAT GTACTGGCGC
GTGGTGAGCA AGCGGTATCT GCGTGCCGAG GCGGCGCTTC AGGTGGATTC GGCGGCTTGA
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| Protein sequence | MFADVRKIAG LAWPVLIGQL AIIAFGVIDT AMVGRYSAVD LAALGLGSSI YISVYIGLTG
ILTALQPITA QLYGARRYIE IGEEVRQALW LALALTVIGF LILFFPGPVL QVARVPEALH
ERTVAYLRIL AFGLPAGLAF RVYSSVTNAV GKPRLVMILQ IGALLLKVPL NTWFIFGGFG
VPALGGPGCA LASTMINWAL AALGMLLLTR VEVFMPFAIF SQFCWPVWRR QAAQLRLGIP
MGLSYLIEVT SYTFMALFIA RFGTTTLAGH QIAGNIGAVL YMTPLSIGIA SSTLVAQALG
AHRPEAARTL SRHGIMMAMA IACCYGAIVL VLRPYIIEGY TPNAQVVTAA LPLVLIVVCY
HLFDALQITT AFVLRAYKVA VVPTVIYAVA LWGVGLGGGY VLGFNVTGGT PEWLTGARGF
WVANTASLAI AGVGLLMYWR VVSKRYLRAE AALQVDSAA
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