| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1797 |
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| Symbol | |
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| ID | 6282711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2017131 |
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| End bp | 2018024 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642621360 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_001895429 |
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| Protein GI | 187923787 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.00908915 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGGCTCGCA TCGTCCTGAA GATCGACGTC GACACGCTAC GCGGCACCCG CGAAGGCGTG
CCGAATCTCG CGCGCATTTT CGACCGCTTC AAGGCGCGCG CCACTTTCCT CTTCAGCCTC
GGGCCCGACC ACACCGGTTG GGCCATGCGC CGCGTGCTGC GGCCGGGCTT TCTGAAGAAG
GTGTCGCGCA CTTCGGTGGT CGAACACTAC GGCGTCAAGC AGTTAATGTA CGGCGTGCTG
CTGCCCGGTC CGGACATCGG CGCCAAGGCC TCGGCGGAGA TGCGCGCGAT CCATGAAGCC
GGCTTCGAAT GCGGCATTCA TACGTGGGAT CACGTGTACT GGCAGGACAA CGTGCGTACG
AAAGATCGCG CATGGACCAC GGCGCAGATG CAGCAAAGCC ACGACCGCTT CGTCGAAGTG
TTCGGCGCGC CGCCGGTTAC GCACGGCGCG GCCGGCTGGC AGATGAACGG CCACGCATTC
GAACAGATCG ACGCCTGGGG CATGCACTAC GCGTCCGACG GGCGCGGCCA CTCGCCGTAT
CTGCCGGTGG TCGGCGGCCG CACGCTCTCG CACGTGCAGA TGCCCACCAC GCTGCCCACG
CTCGACGAAG TGCTCGGCGT GGACGGTGTC GAAACGCACA ACGTCGCCGC ATGGATGTTG
AAGCACACGG AAAACAATCC GCACGACCAA GTGTTCACGC TGCACGCGGA ACTCGAAGGG
CAAAAGCTCG CGCCGATCTT CGAGCAGCTT CTGGAAGGCT GGCGCGCGCA AGGCCACACC
TTCGCGACGA TGGGCGATTA CTACGCAACG CTAGACCGCA GCACGCTGCC ATCGTACCCT
GTTACATGGG GCGAAATTCC AGGGCGCTCC GGCGAGTTGA TTGTCCAGCC CTGA
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| Protein sequence | MARIVLKIDV DTLRGTREGV PNLARIFDRF KARATFLFSL GPDHTGWAMR RVLRPGFLKK
VSRTSVVEHY GVKQLMYGVL LPGPDIGAKA SAEMRAIHEA GFECGIHTWD HVYWQDNVRT
KDRAWTTAQM QQSHDRFVEV FGAPPVTHGA AGWQMNGHAF EQIDAWGMHY ASDGRGHSPY
LPVVGGRTLS HVQMPTTLPT LDEVLGVDGV ETHNVAAWML KHTENNPHDQ VFTLHAELEG
QKLAPIFEQL LEGWRAQGHT FATMGDYYAT LDRSTLPSYP VTWGEIPGRS GELIVQP
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