Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1782 |
Symbol | |
ID | 6284628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 2001768 |
End bp | 2003543 |
Gene Length | 1776 bp |
Protein Length | 591 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642621345 |
Product | glyoxylate carboligase |
Protein accession | YP_001895414 |
Protein GI | 187923772 |
COG category | [R] General function prediction only |
COG ID | [COG3960] Glyoxylate carboligase |
TIGRFAM ID | [TIGR01504] glyoxylate carboligase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.538882 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.818313 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAAGA TGAGAGCCGT CGACGCAGCC GTGCTGGTGC TCGAAAAAGA AGGCATCGAC ACCGCATTCG GCGTTCCGGG CGCAGCGATC AACCCGTTCT ACTCGGCCAT GCGCAAGGCA GGCAACATCA GCCACGTGCT GGCGCGCCAC GTCGAAGGCG CGTCGCATAT GGCCGAAGGC TATACGCGCG CTCAACCGGG CAACATCGGC GTGTGTATCG GGACGTCGGG CCCCGCCGGC ACGGACATGA TCACCGGCTT GTACTCGGCT CAGGCCGACT CCATTCCTAT TCTCGCCATC ACGGGCCAGG CGCCGCGCGC GCGTCTGTAC AAGGAAGACT TCCAGGCCGT CGATATCGAG TCGATCGCCA AGCCCGTCAC CAAGTGGGCC GTCACCGTGC GTGAACCGGC ACTCGTGCCG CGCGTGTTCC AGCAGGCTTT TCACCTGATG CGCTCGGGCC GTCCGGGTCC GGTGCTGGTC GACCTGCCGA TCGACGTGCA GCTCGCCGAA ATCGAATTCG ACATCGACAC CTACGAACCG CTGCCGGTCT ACAAGCCGAA AGCGACGCGC AAGCAGATCG AAGCCGCGCT CACGTTGCTG AATAACTCGG ACAAGCCGCT GATCGTCTCG GGTGGCGGCG TGTTGAACGC AGCCGCTGAA GACCTGCTCG TCACGTTCGC CGAAACCATC GGCGTGCCGG TGATCCCGAC ACTGATGTCG TGGGGCGCGA TTCCCGACGA CCATCCGTTG ATGGCCGGCA TGGTCGGCCT GCAAACCTCG CACCGCTACG GCAACGCGAC GATGCTCGCC TCCGACTTCG TACTCGGCAT CGGCAACCGT TGGGCGAACC GTCATACGGG CAGCGTCGAG GTGTACACGA AGGGCCGCAA GTTCGTGCAC GTCGACATCG AACCGACGCA GATCGGCCGC GTGTTCGGCC CGGATCTGGG CATCGTGTCG GACGCGAAGG CCGCGCTCGA ACTGTTCGTC GAAGTGGCAA AGGAATGGAA AGCCGCGGGC AAGCTGAAGG ACCGCAGCGC ATGGGTCGCC GATTGCCAGG AGCGCAAGCG GACGATGCAT CGCAAGACGC ACTTCGACAA TGTGCCGATG AAGCCGCAGC GCGTCTACGA AGAGATGAAC CAGGTGTTCG GCCGCGACAC GTGCTACGTG AGCACGATCG GTCTCTCGCA GATCGCCGGC GCGCAGTTCC TGCACGTCTA CAAGGCGCGC AACTGGATCA ACTGCGGCCA GGCCGGCCCG CTCGGCTGGA CGATTCCGGC AGCGCTCGGC GTGCGTGCGG CTGATCCGCA GCGTCCGATC GTGGCGCTCT CGGGTGACTA CGACTTCCAG TTCATGATCG AAGAATTGGC AGCGGGCGCG CAATTCAAGC TGCCGTACGT GCATGTGGTG GTGAACAACT CGTACCTCGG CCTGATCCGC CAGGCACAGC GCGCGTTCGA CATGGACTTC TGCGTGCAGC TCGGTTTCGA GAACATCAAC GCGCCGGAGA TGAACGGCTA CGGCGTGGAT CACGTTGCCG TCGCCGAAGG TCTGGGTTGC AAGGCGATCC GCGTGTTCAA ACCGGAAGAA CTGAAGCCCG CGCTGCTGAA GGCGCAATCG ATGCTCTCCG AGTTCAACGT GCCGGTGATC GTCGAAGTGA TTCTCGAACG TGTGACCAAC ATTTCGATGG GCACCGAGAT CGACGCGATC AACGAGTTCG AAGAACTGGC TGCGAAGCGC GAGGACGCAC CGACCGCGAT CAGCATGCTC GACTGA
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Protein sequence | MAKMRAVDAA VLVLEKEGID TAFGVPGAAI NPFYSAMRKA GNISHVLARH VEGASHMAEG YTRAQPGNIG VCIGTSGPAG TDMITGLYSA QADSIPILAI TGQAPRARLY KEDFQAVDIE SIAKPVTKWA VTVREPALVP RVFQQAFHLM RSGRPGPVLV DLPIDVQLAE IEFDIDTYEP LPVYKPKATR KQIEAALTLL NNSDKPLIVS GGGVLNAAAE DLLVTFAETI GVPVIPTLMS WGAIPDDHPL MAGMVGLQTS HRYGNATMLA SDFVLGIGNR WANRHTGSVE VYTKGRKFVH VDIEPTQIGR VFGPDLGIVS DAKAALELFV EVAKEWKAAG KLKDRSAWVA DCQERKRTMH RKTHFDNVPM KPQRVYEEMN QVFGRDTCYV STIGLSQIAG AQFLHVYKAR NWINCGQAGP LGWTIPAALG VRAADPQRPI VALSGDYDFQ FMIEELAAGA QFKLPYVHVV VNNSYLGLIR QAQRAFDMDF CVQLGFENIN APEMNGYGVD HVAVAEGLGC KAIRVFKPEE LKPALLKAQS MLSEFNVPVI VEVILERVTN ISMGTEIDAI NEFEELAAKR EDAPTAISML D
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