| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1755 |
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| Symbol | |
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| ID | 6280916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 1975614 |
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| End bp | 1976615 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642621318 |
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| Product | tRNA-dihydrouridine synthase A |
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| Protein accession | YP_001895387 |
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| Protein GI | 187923745 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00742] tRNA dihydrouridine synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.143555 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCAC CTCACACTCC CAGTCCGCGC CGCGTATCGG TCGCACCGAT GATGGACTGG
ACCGATCGTC ATTGCCGTTC CCTACATCGC GTGATCTCTC GCCATACGTG GCTTTACACG
GAAATGGTGA CGACCGGCGC GCTGCTGCAC GGCGATGTGC CCCGCCATCT CGCATTCACG
CCCGAAGAAG CGCCGGTCGC TCTACAACTC GGCGGCAGCG AACCCGACGA CCTCGCGCGC
TCGGCGAAGC TGGGCGAGCA ATGGGGCTAC GACGAAATCA ATCTGAACTG CGGCTGCCCG
TCCGAGCGTG TGCAACGCGG CGCATTCGGT GCGTGCCTGA TGAACGAGCC GCAACTCGTC
GCCGACTGTG TGAAGGCGAT GCGGGATGCG GTGTCGGTGC CGGTAACCGT GAAGCACCGC
ATCGGCGTGG ATGCCGTGGA AGAGTATGGA TTCGTGCGCG ATTTCGTCGG CACGATTGCG
GAGGCGGGTT GCAATGTGTT CATCGTTCAC GCGCGCAACG CGATTCTCAA GGGCTTGAGC
CCGAAGGAAA ATCGCGAGAT TCCGCCGCTC AAATACGAGT ACGCGTATCA ATTGAAGCGC
GACTTTCCGC AACTGGAGAT CATCATCAAC GGCGGCATCA AGACGCTCGA TGAAGTCGAG
GCGCATCTTG AACACGTCGA CGGTGTGATG CTCGGGCGCG AGGCTTATCA CAATCCGTAT
GTGCTGGCCG ATGTAGATGC CCGCTTCTAC GGGGCGGCGC AAACGCCGCT CACGCGCGAG
CAGGTCGAGG CGAAGTTGAT CGAGTATTGC GCCGCCGAAA TGGTGCGTGG CACGTATCTC
GGCGCCATCA CGCGCCATGC GCTCGGCCTT TATCGTGGTG AAGCAGGGGC GCGTGGATGG
CGACGCGTGT TGTCCGATAG CAAGCGCCTC GCCGCGCGTG ATCTGACCAT CTTCGATGAG
GCAAGACAGC ATCTGCGCGA GCCTATCGAA ATTTTTGAAT AA
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| Protein sequence | MSSPHTPSPR RVSVAPMMDW TDRHCRSLHR VISRHTWLYT EMVTTGALLH GDVPRHLAFT
PEEAPVALQL GGSEPDDLAR SAKLGEQWGY DEINLNCGCP SERVQRGAFG ACLMNEPQLV
ADCVKAMRDA VSVPVTVKHR IGVDAVEEYG FVRDFVGTIA EAGCNVFIVH ARNAILKGLS
PKENREIPPL KYEYAYQLKR DFPQLEIIIN GGIKTLDEVE AHLEHVDGVM LGREAYHNPY
VLADVDARFY GAAQTPLTRE QVEAKLIEYC AAEMVRGTYL GAITRHALGL YRGEAGARGW
RRVLSDSKRL AARDLTIFDE ARQHLREPIE IFE
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