| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1658 |
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| Symbol | |
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| ID | 6282886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1874984 |
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| End bp | 1875838 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642621219 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_001895292 |
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| Protein GI | 187923650 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.92999 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.483631 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCACA GTCTCTCATT CGATTCCGTC AAACAGGGCG CCCGCTTCGC GGCGGCGCTG
GCCGCGTTGT CGCTGCTCGG CGCGTGTGCG TCCAAAGACG TCACGGGCTA TGGCGTCGGG
CCGCAGGCAG AACGCGCCGT GATGGCGCAG CAGGCCAACA AGGATCCCGC GCCGGACACG
CCCGGCATGT ACCTCGGCCT GATCGATCAG ATGCAATCGC AAGGGCTGTA CTTCGCTTCG
CTCGCGCATA TCGACGCGTA CGACAAACAG TACGGCGCGA GCCCCGACTC GATTCTGCTG
CGCGCCGACG CGCTGCGCAT GACCGATCAG CCGGGCGCCG CCGCGAACGC ATACGGACAA
CTGCTGAAGA CGCCGCTCGC CACGCGCGGT TATCGCGGCC TCGGTCTGAT CGCGGGCGCG
GCGGGCGACT TCGCGCGCGC CGCGCAGGAA TTGCAGCAGG CCGTCCAGCT CGCGCCGACC
GATGCGACGA CGCTGTCGGA CCTCGGCTAT GCACGCTTGC GCGACGGCGA TGTGGACGGC
GCGCGCGTGC CGCTCATGAA GGCGGCGGAA CTCGACCAGA CCAATCCGAA GATCATCAGC
AACGTCGCGC TTTATCTGCT TGCCAATGGC AACCAGGCGC AGGCGCTGGC GATCATGAAC
CAGCAGAAGC TCGCACCGGA CGTGCGCGCC GCGATCTGCA GCGATGCGGC GAAAGTGGCC
GCGGCGGGGC GCGCGCAAAC CCGCGGTGCG CCCGCGCAAC AAGAGTCGGG CGCGCTCGGC
ACGGGCGCGC GCACGGTCGC GAGCGCGCAG GGCATCGAGC CCGCGCCGCG TCTGTTGCAG
CGTTTCGCGC AATGA
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| Protein sequence | MTHSLSFDSV KQGARFAAAL AALSLLGACA SKDVTGYGVG PQAERAVMAQ QANKDPAPDT
PGMYLGLIDQ MQSQGLYFAS LAHIDAYDKQ YGASPDSILL RADALRMTDQ PGAAANAYGQ
LLKTPLATRG YRGLGLIAGA AGDFARAAQE LQQAVQLAPT DATTLSDLGY ARLRDGDVDG
ARVPLMKAAE LDQTNPKIIS NVALYLLANG NQAQALAIMN QQKLAPDVRA AICSDAAKVA
AAGRAQTRGA PAQQESGALG TGARTVASAQ GIEPAPRLLQ RFAQ
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