| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1520 |
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| Symbol | |
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| ID | 6283799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1706360 |
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| End bp | 1707721 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642621085 |
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| Product | General substrate transporter |
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| Protein accession | YP_001895158 |
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| Protein GI | 187923516 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.817393 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTATT CCGCCACACC GCAACCCGCA GGCACCGAGG CATTGAGCAT GCAGAGCACG
CCGGCCGCGC AGCCTGTCGA ACGCACGAGC CACGTCAAGG CGATTGCCGC GATCACGCTG
GGCAACGGCC TCGAGTTTTT CGACTTCACG ATCTACAGCT TCTTCGCGAC GATCATCGGC
AAGCTGTATT TCCCGGTGGA GGGGCAACTT GCGCAACTGA TGCTGGCGGT CGGCACGTTC
GGCGTCGGCT TCATCATGCG ACCGGTGGGC GGCATCGTGC TTGGCGCGTA TGCGGACCGC
GCGGGTCGCA AGGCCGCGAT GAGCCTCACG CTGTGGCTGA TGACGCTGGG CTCCGCGATC
ATCGCGTTTG CGCCGACGTA TGCGGCGATC GGGGTCGCCG CGCCGTTGCT CGTGATTCTC
GCGCGCCTGA TTCAGGGTTT TGCTTTGGGT GGTGAGGTCG GCGCGTCGAC GTCGTTGTTG
CTGGAGTATG GAAGCAATAA GACGCGTGGG TTCTACGGCA GTTGGCAATT CGTGAGCCAA
GGGTTGAATA CCGTGTGCGG GTCGTTGCTG GGTGTCGCGC TGGCGGCGGC GCTCTCGACT
GCGGCGCTGG AGAGTTGGGG GTGGCGCGTG CCGTTTGTGA TCGGCATGGC GATGGGGCCG
ATTGGGATTT ATATTCGGCG GCATCTGAAT GAGACGCTGC CTGGTGTGGA AGATGGCGCG
GCGGGTTCGC AGCCGGGTTC GCAGCCTGTC TCGCAGCCGG TGCGCAAGTT GTTTCGCGAG
CATTCGCGTG TGATCACGAC GGGTGTGTTG ACGACGATCG GTGGGACGGC GGCGAACTAC
ATCGTGCTGT TTTATCTGTC GACTTATGCG ATCAGGATTT TGCATTTGCC GATGTCGTCG
GCGCTCTGGG CTGCATGGAC TGCTGCCGTG GTGACGGTAA TCTGTTCGCC GTTTGCCGGC
GCGTTGTCCG ATCGCGTTGG ACGTAAGCGT GTGTTGTGGG TTTCGCGCGT GTTGCTGATT
GCGGCGGTGT ATCCGGCGTT CATGATGATC AATGCTTCGC CGACGGTGCC GGTTTTGTTG
GCAGTGGTCG CTGGTTTGGC CGTGCTTGTG GCGTTTACCG CTGTGCCTAA TATCGTCATG
TTGCCGGAGA TGTTTCCTCG CGAGATTCGT GCTACCGGGA TGTCGATTGT TTATTGTCTC
GGGGTTTCTA TCTTTGGTGG GTTTGCGCAG TTTTTCGCTA CGTGGTTGAT TCAGGTTTCT
GGTAGCAACC TCGCGCCTGC GTGGTATCTG ATTGGGTGTG GGGTCGTTTC TTTGTTGCCG
TTGCCGTTTA TGCGGGAGAC TGCGGGGCGG GATATTGGGT AG
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| Protein sequence | MDYSATPQPA GTEALSMQST PAAQPVERTS HVKAIAAITL GNGLEFFDFT IYSFFATIIG
KLYFPVEGQL AQLMLAVGTF GVGFIMRPVG GIVLGAYADR AGRKAAMSLT LWLMTLGSAI
IAFAPTYAAI GVAAPLLVIL ARLIQGFALG GEVGASTSLL LEYGSNKTRG FYGSWQFVSQ
GLNTVCGSLL GVALAAALST AALESWGWRV PFVIGMAMGP IGIYIRRHLN ETLPGVEDGA
AGSQPGSQPV SQPVRKLFRE HSRVITTGVL TTIGGTAANY IVLFYLSTYA IRILHLPMSS
ALWAAWTAAV VTVICSPFAG ALSDRVGRKR VLWVSRVLLI AAVYPAFMMI NASPTVPVLL
AVVAGLAVLV AFTAVPNIVM LPEMFPREIR ATGMSIVYCL GVSIFGGFAQ FFATWLIQVS
GSNLAPAWYL IGCGVVSLLP LPFMRETAGR DIG
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