Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1450 |
Symbol | |
ID | 6281704 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 1626519 |
End bp | 1627634 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642621016 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001895089 |
Protein GI | 187923447 |
COG category | [R] General function prediction only |
COG ID | [COG4239] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTCGT CGACCCCCGC ATCCAATTCA ACCGCCAGGA CCGCTGACGC GGCCGGCGCG GCGCACGCGG CGTCGCCGTC TCCGTGGCGG CGTACGTGGC TGCGTTTCAG GCGGCAGCGT CTGGGCTACT GGAGCCTCGT GATCTTCGTC TCGCTGTTCG CCATCAGCCT GCTCGGCGAG GTGTTGTCCA ACGACCGTCC GCTACTCGTT CGTTACGACG GGCACTATTA CTTCCCGATC GTGAAGGACT ACCCGGAAAC GCTATTCGGC GGCGATTTCC CGGCGCGTGC CAATTACCTC GACCCGTATA TCCGCTCGCG GCTCGAATCG AACGGCAACT TCGCGATTTA TCCGCCGAAT CATTTTCACT ACGACACGAT CGACTATTTC GCCGCGCATC CGTATCCGGC GCCGCCCACC GCGAGCAACT GGCTCGGCAC GGATCAATTC GGACGCGACG TGCTGGCGCG GCTTTTGTAC GGCTTCCGCC TGTCGGTGCT GATGGCGCTG GCGCTCACGG TGTCCGGTGT CGTGGTCGGC GTGCTGACGG GCGCGGTGCA GGGATTTTAC GGAGGACGAA CCGATCTGAT CGGCCAGCGC CTGATCGAAA TCTGGAGTTC GATGCCCGAC CTGTACCTGC TGATCATCTT CGCATCGATC TTCGAGCCCA CGTTGTGGCT GCTCTTCATT CTGCTGTCGA TGTTCGGCTG GCTCGTGCTG TCCGATTACG TGCGCGCCGA ATTCCTGCGC AACCGTTCGC TCGATTACGT CAAGGCGGCG CGCACCATGG GCCTTACTAA CTGGCAGATC ATGTGGCGTC ATGTTTTGCC GAATAGTTTG ACGCCGGTGA TTACCTTCCT GCCGTTCCGC ATGAGCGCCG CGATTCTCTC ACTGACCAGC CTCGACTTTC TCGGCCTGGG CGTGCCGCCG CCCACGCCGA GCCTCGGCGA ACTGCTGCAG GAAGGCAAGA ACAATCTCGA CGCGTGGTGG ATCTCGATGT CGGCATTTGC CGCGCTGGTG ATCACTCTGC TGTTGTTAAC CTTCATGGGC GACGCATTGC GCAACGCGCT GGATACGCGC TCACGTGGTT CGGCTTTCGG CGGAGGTCCG CGATGA
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Protein sequence | MSSSTPASNS TARTADAAGA AHAASPSPWR RTWLRFRRQR LGYWSLVIFV SLFAISLLGE VLSNDRPLLV RYDGHYYFPI VKDYPETLFG GDFPARANYL DPYIRSRLES NGNFAIYPPN HFHYDTIDYF AAHPYPAPPT ASNWLGTDQF GRDVLARLLY GFRLSVLMAL ALTVSGVVVG VLTGAVQGFY GGRTDLIGQR LIEIWSSMPD LYLLIIFASI FEPTLWLLFI LLSMFGWLVL SDYVRAEFLR NRSLDYVKAA RTMGLTNWQI MWRHVLPNSL TPVITFLPFR MSAAILSLTS LDFLGLGVPP PTPSLGELLQ EGKNNLDAWW ISMSAFAALV ITLLLLTFMG DALRNALDTR SRGSAFGGGP R
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