Gene Bphyt_1372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1372 
Symbol 
ID6283735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1531032 
End bp1531679 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content59% 
IMG OID642620932 
ProductGlutathione S-transferase domain 
Protein accessionYP_001895011 
Protein GI187923369 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.749181 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00129076 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCAAGC TGTGCGGTTT CGCGCTCTCT AACTATTACA ACAAAGTGAA GTTCGTGCTG 
CTCGAACACG GCATTCCGTT CGAGGAAGTG TCCGTGAAAC CCAGCCAGGA CGAGGCCATG
CTCGAGCATT CGCCGCTCGG CAAAGTGCCT TATCTTCAAA CTGAAGACGG CGATCTGAGC
GAATCGCAAT GCATTGTCGA GTATCTGGCG GCGCGTTTTC CCGATAAGGC GATTTTCGCC
GCCGACCCGT GGGAAGCGGC CAAGGAGCGC GAACTGATCA TGTTCGTCGA CGTGCATCTC
GAACTGACTG TGCGCAATCT CTACAAGGAG GCATTCTTTG GCGGCATCGT GACCGAGGCG
ACCAAAGGGC GCGTCGAGAA ACTGCTCAGG CATCACATTG CCGGCTTCAA ACGGATCGCG
AAGTTCGGGC CGTATCTGAG GGGCGAGCGC TTCAGCGTCG CGGATACGGC CGGCTATGTG
AGCTTGCCGC TGGTGGGCAT GGCGACGCAG ACCATCTACG GCAGCGATTT TCTGCTCGAC
GCCGGAATCG ATTGGAAGAG CTATGTGAAA GCGGTCAACG TGAGGCCGGC CGCGCAGCGT
GTGACCGAGG ACCGCAAGGC GTATATCGCG GCGTCGCGCC CGACTTGA
 
Protein sequence
MIKLCGFALS NYYNKVKFVL LEHGIPFEEV SVKPSQDEAM LEHSPLGKVP YLQTEDGDLS 
ESQCIVEYLA ARFPDKAIFA ADPWEAAKER ELIMFVDVHL ELTVRNLYKE AFFGGIVTEA
TKGRVEKLLR HHIAGFKRIA KFGPYLRGER FSVADTAGYV SLPLVGMATQ TIYGSDFLLD
AGIDWKSYVK AVNVRPAAQR VTEDRKAYIA ASRPT