| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1185 |
|---|
| Symbol | |
|---|
| ID | 6283832 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 1327917 |
|---|
| End bp | 1328444 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642620745 |
|---|
| Product | glycoside hydrolase family 24 |
|---|
| Protein accession | YP_001894825 |
|---|
| Protein GI | 187923183 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3772] Phage-related lysozyme (muraminidase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCTCA CGGAGAACGC AGAGACGCTT GTGCTGTTCG CGTATCCGGA TCCAGCGTCG
CCACTCGCCA AAGCCCTGCA GGCGCGGGGC CTATGGCAGC GGGTGCTCGC TGGCGGTGCG
ATTCCGCCTG ACCTCGGCTC GCTGAACGGT GCGCCGTGGA CAGGCGGCTG GGGCCATACC
GGCCCGGACG TCAGGCCCGG CATGACGATC ACGCGCGACA TGGCCGTCGA CTGGTTGCGC
GCGGACGTGC GCGGTGCCGA AGCCGTGGTC AAACGCGACG TCAAGGTTGC TTTGAACCAG
GAGGAATACG ACGCACTCGT CGACCTCGTA TTCAACATCG GCAGCGGCAA TTTCGACACC
TCGACGCTTT TGCGCAAGCT CAACGCCAGC GACACGGACG GCGCAATCGC CGAATTCGCA
CGCTGGAATC AGGCGGGCGG CAAGGTGCTG GTGGGGCTAG TCAAGCGGCG CGAAGCAGAG
CGCGTGCTGT TCCAGCTCGG CGCAAATCAC GCGAGGGCCG CCGCATGA
|
|---|
| Protein sequence | MSLTENAETL VLFAYPDPAS PLAKALQARG LWQRVLAGGA IPPDLGSLNG APWTGGWGHT
GPDVRPGMTI TRDMAVDWLR ADVRGAEAVV KRDVKVALNQ EEYDALVDLV FNIGSGNFDT
STLLRKLNAS DTDGAIAEFA RWNQAGGKVL VGLVKRREAE RVLFQLGANH ARAAA
|
|---|
| |