Gene Bphyt_1120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1120 
Symbol 
ID6282633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1262723 
End bp1263502 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content61% 
IMG OID642620679 
ProductABC transporter related 
Protein accessionYP_001894760 
Protein GI187923118 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4598] ABC-type histidine transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAACA AGAAGCAGAA GCTCTTCGTC GACGAGCTTC ATAAACAGTA CGGCGACAAC 
GAAGTGCTCA AGGGCGTGTC GCTCAAAGCG AACGCCGGCG ACGTGATCAG CGTGATCGGC
TCGTCCGGTT CGGGCAAGAG CACGATGCTT CGCTGCATCA ACTTTCTCGA GCAGCCGAAC
TCGGGGCGCA TCTTCGTCGA CGGTGAAGAA GTGCGCACGC AGATCGGCAA GAACGGCGCG
CTGCGCGTGT CGGACCCGAA GCAGTTGCAG CGTGTGCGCA CCAGGCTGTC GATGGTGTTC
CAGCACTTCA ACCTGTGGTC GCACATGAAC GTGCTCGAGA ACATCATCGA GGCGCCGGTC
AACGTGCTGG GTCTGAAGCG CAAGGAAGCC GAAGACCGCG CGCGTGAATA TCTGGAAAAG
GTTGGGCTCG CGCCGCGCCT GGAGAAACAG TATCCGTCGC ATCTGTCGGG CGGCCAGCAG
CAGCGCGTGG CGATCGCACG CGCGCTCGCC ATGCATCCCG ATGTGATGCT GTTCGACGAA
CCGACCTCCG CGCTCGACCC CGAGCTGGTC GGCGAAGTGC TCAAGGTCAT GCAGACGCTC
GCCGAAGAAG GCCGCACGAT GATCGTGGTC ACGCATGAAA TGGCTTTCGC GCGCAACGTG
TCGAACCACG TGATGTTCCT GCATCAAGGC CGCGTGGAAG AAGAAGGCCA CCCCGACGAA
GTCTTCAGGA ACACGAAGAG CGACCGGCTC AAGCAGTTCC TCTCCGGCAG CCTCAAGTAG
 
Protein sequence
MNNKKQKLFV DELHKQYGDN EVLKGVSLKA NAGDVISVIG SSGSGKSTML RCINFLEQPN 
SGRIFVDGEE VRTQIGKNGA LRVSDPKQLQ RVRTRLSMVF QHFNLWSHMN VLENIIEAPV
NVLGLKRKEA EDRAREYLEK VGLAPRLEKQ YPSHLSGGQQ QRVAIARALA MHPDVMLFDE
PTSALDPELV GEVLKVMQTL AEEGRTMIVV THEMAFARNV SNHVMFLHQG RVEEEGHPDE
VFRNTKSDRL KQFLSGSLK