Gene Bphyt_1045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1045 
Symbol 
ID6282793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1180155 
End bp1181456 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content66% 
IMG OID642620607 
ProductFAD dependent oxidoreductase 
Protein accessionYP_001894688 
Protein GI187923046 
COG category[R] General function prediction only 
COG ID[COG2907] Predicted NAD/FAD-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.687688 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCATT CCGCACCGAC CTCACCACTA CCGCGCGGCT CGCGGGTCGC GGTCATCGGC 
GCCGGCATCT CGGGTTTGGC CAGCGCGTAT CTGCTGGCGC GCCACCATCG GGTCACGCTG
TTCGAATCGG CGGCGTACCT GGGCGGCCAC ACCAATACCG TGGACGTCAC GCTCGACGGC
CACACGCATC CCGTCGACAC CGGTTTCCTG GTGTTCAACG ACCGCACCTA TCCGAACCTG
ATCGCGCTAT TCGCCGAACT CGGCGTGCAA TCGCATCCGA GCGACATGAC CTTCTCCGTT
TCGCTCGACG AAGGCCGTCT CGAATGGGCC GGCACCAGTC TGAACACTGT GTTCGCGCAG
CGCCGCAACC TGTTTTCGCC GACCTTCATC GGCATGCTGC GCGACATCAT GCGGTTTAAC
GGCAGCGCGC AACGCAACCT CGAACTGGCG ATTGCAACGC GCGCGTCGAT GGGTGAGCTG
CTGACGGAAG GCGGCTACGG CGGCGCGTTC CAGCGACAGT ATTTGCTGCC GATGGCCGCC
GCGATCTGGT CGAGCGCTAC CGCCGATATC CTCGCGTTCC CGGCCACGAC TTTCCTGCGC
TTCTGTCTGA ACCACGCACT GCTGCAAGTG AATCGCCGGC CGCAGTGGCG GACCGTGGTC
GGCGGCGGCC GCGAGTATGT GAAGCGTATA ACCAGCACGC TGGACGACGT CCGCATCGGC
ACAGCGGTGC GCGGCGTGCG GCGCGACACC GACGGCGTCG ACGTGTTCAC TGACCACGGC
AGCGAGCGCT TCGACGCGCT GGTGCTCGCG ACTCACGCAC CGACCACGCT GCGCCTCCTG
CAAGACGCCG ATCAGGACGA GCGCGGCGTG CTCGCCGCCG TGCGCTATCA ACCGAACGTC
GCGGTGCTGC ATACGGATAC GAATCTGCTG CCGCGTCGTC AGCGCGTGTG GTCGGCGTGG
AATTATCTTG GCAGCCGCAG TGCCGACGGC ACGCATCCGG TGTGCGTCAG TTATCTGGTC
AATCAATTAC AGCCGCTGCC GTTCAGGACG CCGCTCGTCG TCACGCTCAA CCCGGTGACC
CAGCCGGCGC CGGGCACCGA ACTGCGCCGC TTCGTCTACG ATCATCCGCT GTTCGATCTG
GCCGCCATCG ACGCGCAGCA TCGTCTGCCA TCGTTGCAAG GCAAGCGCCG CACGTGGTTC
GCGGGCGCAT GGACGGGTTA CGGTTTTCAC GAGGATGGTC TGAAATCGGC GCTGCGCGTC
GCGGCCGATT TCGACGCATC GCCGGCATGG GCCAGGCTAT GA
 
Protein sequence
MPHSAPTSPL PRGSRVAVIG AGISGLASAY LLARHHRVTL FESAAYLGGH TNTVDVTLDG 
HTHPVDTGFL VFNDRTYPNL IALFAELGVQ SHPSDMTFSV SLDEGRLEWA GTSLNTVFAQ
RRNLFSPTFI GMLRDIMRFN GSAQRNLELA IATRASMGEL LTEGGYGGAF QRQYLLPMAA
AIWSSATADI LAFPATTFLR FCLNHALLQV NRRPQWRTVV GGGREYVKRI TSTLDDVRIG
TAVRGVRRDT DGVDVFTDHG SERFDALVLA THAPTTLRLL QDADQDERGV LAAVRYQPNV
AVLHTDTNLL PRRQRVWSAW NYLGSRSADG THPVCVSYLV NQLQPLPFRT PLVVTLNPVT
QPAPGTELRR FVYDHPLFDL AAIDAQHRLP SLQGKRRTWF AGAWTGYGFH EDGLKSALRV
AADFDASPAW ARL