| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1028 |
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| Symbol | |
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| ID | 6284130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1158425 |
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| End bp | 1159672 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642620589 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_001894671 |
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| Protein GI | 187923029 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00732462 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0899654 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTTC GCGCGATCAT GGGCGCTTTG TGCGCCGCAG GTCTGATGTG TGGCGTCTCG
GCCGTGCAAG CCGCCGAGTC GATCGAAGTG TTGCACTGGT GGACCTCGGG CGGCGAATCG
AAAGCCGTCG GCGTCCTCAA GGACGACATG ACGAAGCAGG GTTACACGTG GAAGGACTTC
GCGGTTGCGG GTGGCGCCGG CGCGGCTGCC ATGACGGCAC TCAAGACGCA AGTGATCTCG
GGCAACGCAC CGAGCGCTGC GCAGATCAAA GGTCCGCTGA TCCAGGACTG GGCGTCGCAA
GGCGTGCTGG TGCCGATCGA CGCGGCCGCC GGCGACTGGA AGAAGAACCT GCCGCCGGAA
ATCGACAAGA TTATGCACGC GGACGGTCAC TACGTCGCAG CGCCGTTCTC GGTGCACCGC
GTGAACTGGC TGTACATCAA CAAGGCAGCG TTGGACAAGG CGGGCGGCAA GGCGCCGACC
ACGTGGCCTG AGTTCTTCGC GGTGGCCGAC AAGATGAAGG CCGCGGGCAT CCAGCCGATC
GCGATGGGCG GCCAGCCGTG GCAAGACCTG ACGCTGTGGG AAGACGTCGT GCTGTCGCAA
GGCGCGGACT TCTACAAGAA GGCGCTGGTC GACCTCGACG AGAAGACGCT GACTTCGGAC
AAGATGGTCG GCGTGTTCGA CACGGTCCGC AAGATCCAGG GTTACTTCGA CGCGGGCCGC
ACGGGTCGTG ACTGGAACCT GGCAACGGCT ATGGTCATCA ACGGCAAGGC CGGCATGCAG
TTCATGGGCG ACTGGGCGAA GGGCGAATTC GCCAACGCCG GCAAGAAGTC GGGCTCGGAC
TACATCTGCG CCGCTGTCCC GGGCACGGAA AAGTCCTACA CGTTCAACGT CGACTCGTTC
GTGTTCTTCC AGCAGAAAGG CCAGAAGGCG GCAACGCCGG GTCAGCTCGC GCTGGCGAAG
ACGATCATGT CGCCGGAGTT CCAGGAACAG TTCAGCCTGA ACAAGGGGTC CATCCCGGTT
CGTCTGGGCG TGTCGATGGC CAAGTTCGAC GACTGCGCGA AGAAGTCGTA CGCGGATGAA
CAAGTGGCGA TCAAGTCGGG CGGCTATGTG CCTTCGCTGG CACACGGCAT GGCGCAACCG
GATGCAGCAG CCGGCGCGAT CTCGGACGTG GTCACGAAGT TCATGAACTC GCAGCAGGAT
TCGAAGAGCG CAGTTGCCGC GCTCGCGAAG GCAGCGAAGA CCAAGTAA
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| Protein sequence | MKFRAIMGAL CAAGLMCGVS AVQAAESIEV LHWWTSGGES KAVGVLKDDM TKQGYTWKDF
AVAGGAGAAA MTALKTQVIS GNAPSAAQIK GPLIQDWASQ GVLVPIDAAA GDWKKNLPPE
IDKIMHADGH YVAAPFSVHR VNWLYINKAA LDKAGGKAPT TWPEFFAVAD KMKAAGIQPI
AMGGQPWQDL TLWEDVVLSQ GADFYKKALV DLDEKTLTSD KMVGVFDTVR KIQGYFDAGR
TGRDWNLATA MVINGKAGMQ FMGDWAKGEF ANAGKKSGSD YICAAVPGTE KSYTFNVDSF
VFFQQKGQKA ATPGQLALAK TIMSPEFQEQ FSLNKGSIPV RLGVSMAKFD DCAKKSYADE
QVAIKSGGYV PSLAHGMAQP DAAAGAISDV VTKFMNSQQD SKSAVAALAK AAKTK
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