| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0954 |
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| Symbol | |
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| ID | 6282438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 1074509 |
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| End bp | 1075804 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642620514 |
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| Product | urea ABC transporter, urea binding protein |
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| Protein accession | YP_001894597 |
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| Protein GI | 187922955 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | [TIGR03407] urea ABC transporter, urea binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGTC GCAGTCTGTT GAAGTTCGGC TCCATGTCGG GCGCGTTGGC GCTTGCAGGT
CAGGTTCCGT TTGCGCAGGC GCAGTCCAGT GGTCCGATCA AGGTAGGTAT CCTGCATTCG
CTGTCGGGCA CGATGGCGAT CTCGGAGACA TCGCTTAAGG ACACGGCGTT GATGACCATT
GCGGACATCA ACAAGAACGG CGGCGTGATG GGCCGTCAAC TGGAACCGGT GGTGGTCGAC
CCGGCGTCGA ACTGGCCGCT CTTCGCTGAA AAAGCGCGTC AGCTGATCAC GCAGGACAAG
TGCGCCGTGG TGTTCGGCTG CTGGACTTCC GTGTCGCGCA AATCGGTGCT GCCGGTGTTC
GAGGAACTGA ACGGCCTGCT GTTCTACCCG GTCCAGTACG AAGGCGAGGA AATGTCGCGC
AACGTGTTCT ACACGGGCGC AGCGCCGAAT CAGCAGGCGA TTCCGGCGAC CGAATACCTG
ATGAGCGCGG AAGGCGGCGG CGCCAAGCGC TTCTTCCTGT TGGGCACCGA CTATGTGTAC
CCCCGCACGA CCAATAAGAT CCTGCGCGCG TTCCTCAAGT CGAAGGGCGT GCAGGAAGCC
GATATCCAGG AGGTCTACAC GCCGTTCGGC CACAGCGACT ATCAGACCAT CGTCGCGAAC
ATCAAGACCT TCTCGCAAGG CGGCAAGACC GCGGTGATCT CGACGGTGAA CGGCGACTCG
AACGTGCCGT TCTACAAGGA ACTGGGCAAC CAGGGGTTGA AGGCGTCGGA CGTGCCGGTC
GTCGCGTTCT CGGTCGGCGA GGAAGAACTG CGCGGCATCG ATACGAAGCC GCTGGTCGGC
AACCTGGCTG CGTGGAACTA CTTCATGTCG CTGCGCAACC CGGCCAACGA GAAGTTCAAG
AAGCAATGGG CTGCATGGGT CGCGCAGAAC AACCTGCCGG GCGGCACCAA GCGCGTGACC
AACGACCCGA TGGAAGCGAC CTTCGTCGGC ATCCATATGT GGAAGCAGGC GGTCGAGAAG
GCCAAGAGCA CGGAAGTGGA CAAGGTGCGC GTGGCGATGG TCGGCCAGAC CTTCGCGGCG
CCGTCGGGCT TCACGCTCGA AATGGACGGC AACCACCATC TGCACAAGCC GGTCATGATC
GGTGAAGTGC GCGCCGATGG TCAGTTCAAT GTGGTGTGGC GGACCAAGAC CGCGATTCGC
GCGCAGCCGT GGAGCCCGTT CATTGCCGGC AATTCGAGCA AGCCGGACGT GGTCAGCTCG
ATTCCGGCGT TCCTGAAGCG CTCGCGCGTC GCCTGA
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| Protein sequence | MKRRSLLKFG SMSGALALAG QVPFAQAQSS GPIKVGILHS LSGTMAISET SLKDTALMTI
ADINKNGGVM GRQLEPVVVD PASNWPLFAE KARQLITQDK CAVVFGCWTS VSRKSVLPVF
EELNGLLFYP VQYEGEEMSR NVFYTGAAPN QQAIPATEYL MSAEGGGAKR FFLLGTDYVY
PRTTNKILRA FLKSKGVQEA DIQEVYTPFG HSDYQTIVAN IKTFSQGGKT AVISTVNGDS
NVPFYKELGN QGLKASDVPV VAFSVGEEEL RGIDTKPLVG NLAAWNYFMS LRNPANEKFK
KQWAAWVAQN NLPGGTKRVT NDPMEATFVG IHMWKQAVEK AKSTEVDKVR VAMVGQTFAA
PSGFTLEMDG NHHLHKPVMI GEVRADGQFN VVWRTKTAIR AQPWSPFIAG NSSKPDVVSS
IPAFLKRSRV A
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