| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0767 |
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| Symbol | |
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| ID | 6283387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 847210 |
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| End bp | 847770 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642620331 |
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| Product | hypothetical protein |
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| Protein accession | YP_001894414 |
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| Protein GI | 187922772 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.130879 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATCAGA ATGCAGTCCG TCCGCCGCGA TACCGCGGCT TCACGCTTGT CGAAACGCTG
GCCGTTATTG CGTTGCTGGC CGTGGTCGCT GTAATGGCCA CGCCGTCGTT CGTAGCGTGG
CACGTGCGAG ACCAGGTCGA CGCCCGCGCG AAGGCGCTTG CCTCGACGCT CGCTTATGCG
CGCAGTGAAG CGTTACGCCG AGGCGCGCGC GTCACCGTGT GCCGGACCGA TGCCGCGCGC
CATTGTCTCG CGGCGGGGCA GCCGTGCGGC AATGGCGTCG CTGACTGGTC GTGCGGCTGG
GCCGTTCTGG CCGACCGTGG CGGCACGCTA TCGCTCTTGC GCGCGCAACC TCTGCTTGCG
GCCGTGCGTA TCACCGGCAC GCAGACGAAT CTCACGTTCA CGCCGCCGGC CGGACAATTG
ATCGGTACGT TTCGCAGTTT CGATATCGCG CCGCGTACAC CGTCGAGGGT GACGCAAGGG
GACAAGTGGC GACGCTGCAT TCACATTGCT GCGGGCGGCC GCGCGCGGGT CGTCGAGGGC
GCATGCGGAG CAGCGTCATG A
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| Protein sequence | MNQNAVRPPR YRGFTLVETL AVIALLAVVA VMATPSFVAW HVRDQVDARA KALASTLAYA
RSEALRRGAR VTVCRTDAAR HCLAAGQPCG NGVADWSCGW AVLADRGGTL SLLRAQPLLA
AVRITGTQTN LTFTPPAGQL IGTFRSFDIA PRTPSRVTQG DKWRRCIHIA AGGRARVVEG
ACGAAS
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