| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0642 |
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| Symbol | |
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| ID | 6282116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 700749 |
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| End bp | 701135 |
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| Gene Length | 387 bp |
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| Protein Length | 128 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642620207 |
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| Product | Endoribonuclease L-PSP |
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| Protein accession | YP_001894291 |
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| Protein GI | 187922649 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
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| TIGRFAM ID | [TIGR00004] endoribonuclease L-PSP, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.297456 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGCGAT ATGGTGTTGA AGGCGGGAAG GGAACGGGCG GTCAGCATAT GCCGTTTGCG
CGTGCGGTCG AAGCGGACGG CTGGCTGTTC GTATCAGGAC AGACGCCGAT GGAAAACGGC
GAAGTGATCA ACGGCGGCAT CGTCGAACAA TCGCATAAGG CGATTCAGAA CGTGTTCGCG
ATCCTGAAGG AAGCCGGCTA CGGCGCGGAA CATGTGGTCC GCTGCGGCGT GTGGCTGGAT
GACCCGCGTG ACTTCGCGTC GTTCAACAAG GTGTTCCGCG AGTACTTCGG CGAAAATCCG
CCGGCGCGCG CGTGTGTCGT TTCTTCGATG GTGATCGATT GCCGGGTTGA AGTGGATTGC
GTGGCTTATA AGAAGCCTAC GGCTTAA
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| Protein sequence | MKRYGVEGGK GTGGQHMPFA RAVEADGWLF VSGQTPMENG EVINGGIVEQ SHKAIQNVFA
ILKEAGYGAE HVVRCGVWLD DPRDFASFNK VFREYFGENP PARACVVSSM VIDCRVEVDC
VAYKKPTA
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