| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0463 |
|---|
| Symbol | aceK |
|---|
| ID | 6281571 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 514158 |
|---|
| End bp | 515996 |
|---|
| Gene Length | 1839 bp |
|---|
| Protein Length | 612 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642620027 |
|---|
| Product | bifunctional isocitrate dehydrogenase kinase/phosphatase protein |
|---|
| Protein accession | YP_001894112 |
|---|
| Protein GI | 187922470 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4579] Isocitrate dehydrogenase kinase/phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCACT TCCCCAAACT GCTGTCGTCG CAGATCGGCT TTGACCTCGC GCAGACCATG
CTCGAAGGGT TCGACCGGCA TTACCGGATC TTTCGCGACG CCGCGATCCA CGCCAAGACG
CTCTTCGAAA AAGGCGACTG GCACGGACTG CAGAAGCTCG CGCGCGATCG CATTACTTCA
TACGACGAGC GCGTCGACGA ATGCGTCGAA CTGCTCGAAG ACGAATACGA CGCGGAAAAA
ATCGACAGCG AAGTGTGGCA GCAGATCAAG CTCCATTACA TCGGCCTGTT GACCACGCAC
CGTCAGCCGG AGTGCGCGGA AACGTTTTTC AATTCGGTGT GCTGCAAGAT CCTGCACCGC
TCGTACTTCA ACAACGACTT CATTTTCGTA CGACCGGCCA TCTCGACCGA ATACATCGAG
AACGATGAAC CGGCCGCGAA ACCGACTTAC CGTGCGTACT ATCCCGGCAA AGACGGACTC
GCGGCCACGC TCGAACGCAT CGTCACGAAC TTCCAGTTGG AGCCGCAGTT CGAAGACCTG
ACGCGCGACG TCGGCTGCGT GATGCAAGCG ATCCACGACG CATTCGGTGC GTTCGACGAA
GCGCCCAATT TCCAGATTCA CGTGCTCTCG TCGCTGTTCT ACCGGAACAA GTCGGCGTAT
ATCGTCGGAC GCATCATCAA CGGTGACCTG CTGCTGCCGT TCGCTGTGCC CTTGCGTCAT
GTCAAGCCAG GCGTGCTCGC GCTCGACACC GTGCTGCTCA AGCGTGAACA GCTGCTGATC
ATTTTCAGCT TTTCGCATTC GTACTTTCTG GTGGATATGG AAGTGCCGTC CGCTTACGTC
GAATTTCTCG GCACCATCAT GCCGGGCAAG CCGAAGGCGG AAATCTATAC GTCGGTGGGT
TTGCAGAAGC AGGGCAAGAA TCTGTTCTAT CGCGACCTGC TGCATCATCT CTCGCATTCG
AGCGATCAGT TCATCATCGC GCCCGGCATC AAGGGGCTCG TGATGCTGGT GTTCACGCTG
CCGTCGTTTC CCTACGTGTT CAAGCTGATC AAGGACAACT TCCCGCCGCC GAAGGAAACC
ACGCGCGCGC AGATCCAGAG CAAGTATCAG CTCGTCAAAC GGCACGACCG GCTGGGCCGC
ATGGCCGACA CGCTCGAATA TTCGAGCGTG GCGTTGCCCC GCTCGCGTCT CGACGACGCG
CTGGTGCGCG AGCTCGAAAA GGAAGTGCCG TCGCTGCTCG AATACGAGGG CGAGAACCTC
GTGATTCGCC ACATGTATAT CGAACGCCGC ATGGTGCCGC TCAACCTGTT CCTGCAGAAC
GGCAACGACG AGGACGTCGA GCACGGCATC AAGGAATACG GCAACGCGGT GAAGGAACTG
ATGCAGGCGA ACATCTTTCC TGGCGACATG CTGTACAAGA ACTTCGGCGT GACGCGTCAC
GGCCGCGTCG TGTTCTACGA CTATGACGAA ATCGAATATC TGACCGACTG CAACGTGCGC
GCAGTGCCGG CGCCGCGTAA CGAGGAGGAC GAAATGTCGG GCGAGCCGTG GTACTCGGTC
GGCCCGCACG ACATCTTCCC GGAAACGTAC GGCACATTTC TGCTCGGCGA CCCACGCGTG
CGCCGTTCCT TCATGCAGCA TCACGCGGAC TTCTTCGATC CTGCGCTATG GCAACGGCAC
AAGGATCATC TATTGAAAGG CGAACTGCCC GACTTTTTCC CGTACGACGA CAGCGCGCGC
TTCTGCAACT GCTATCCGGA ACGCTTTGCC GATGCCGCCG GCCGCGCATC GCCCGAACCG
GATGCGCCAG CCGACGCGCG CAGCGTGCGG GTGGCGTGA
|
|---|
| Protein sequence | MNHFPKLLSS QIGFDLAQTM LEGFDRHYRI FRDAAIHAKT LFEKGDWHGL QKLARDRITS
YDERVDECVE LLEDEYDAEK IDSEVWQQIK LHYIGLLTTH RQPECAETFF NSVCCKILHR
SYFNNDFIFV RPAISTEYIE NDEPAAKPTY RAYYPGKDGL AATLERIVTN FQLEPQFEDL
TRDVGCVMQA IHDAFGAFDE APNFQIHVLS SLFYRNKSAY IVGRIINGDL LLPFAVPLRH
VKPGVLALDT VLLKREQLLI IFSFSHSYFL VDMEVPSAYV EFLGTIMPGK PKAEIYTSVG
LQKQGKNLFY RDLLHHLSHS SDQFIIAPGI KGLVMLVFTL PSFPYVFKLI KDNFPPPKET
TRAQIQSKYQ LVKRHDRLGR MADTLEYSSV ALPRSRLDDA LVRELEKEVP SLLEYEGENL
VIRHMYIERR MVPLNLFLQN GNDEDVEHGI KEYGNAVKEL MQANIFPGDM LYKNFGVTRH
GRVVFYDYDE IEYLTDCNVR AVPAPRNEED EMSGEPWYSV GPHDIFPETY GTFLLGDPRV
RRSFMQHHAD FFDPALWQRH KDHLLKGELP DFFPYDDSAR FCNCYPERFA DAAGRASPEP
DAPADARSVR VA
|
|---|
| |