Gene Bphyt_0198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0198 
Symbol 
ID6280837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp212745 
End bp213533 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content62% 
IMG OID642619765 
ProductIstB domain protein ATP-binding protein 
Protein accessionYP_001893854 
Protein GI187922212 
COG category[L] Replication, recombination and repair 
COG ID[COG1484] DNA replication protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.00320688 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACCCCA GTCCTGAACT GAACACAACC CTCAAGCAGT TGCGCCTGTC CGGCGTGCTC 
GATTCCCTTG AGCAGCGCAA CCGGCAGGCC ATCGACGGCC AGCTCGCGTA CACGGAGTTC
CTCGCCATGC TGCTGCACGA CGAAGTCGCC CGACGTGATC AGAAGAAGCT GCGCACCCGC
CTGGCCCGCG CTGGCTTCGC AATGGGCAAG ACCCTCGAAA CGTTCGACTT CGACCGGCTG
CCGAACCTGA ATCGAACCCA TATCCACGAC CTCGCTACCG GTCGCTATAT CGATGAGAAG
GTCGCGATTC TGATTGCCGG ACCAACCGGT ACCGGCAAGT CGCACCTGGC CCAGGCACTC
GGCAATTGCG CCGCCCGGCA AGGACGTGAT GTCGTGTTCG CCACGCAGAC CCGGCTGTTG
AACAGTCTGC AGGCAGCGCG CGCGACCGGT ACCTATGAGC GCAAACTGAA ACAGCTTGCC
AGCGTACCGG TTCTCATCGT CGACGACTTC GCGCTCAAGC CGCTGCGCTC GCCGCAGGAT
GAAGACTTCC ACGACCTGAT CGCGGAAAGG TACGAGACCG CTGCGACGAT CCTGACCAGT
AACCTCGACT TCAGCGAATG GGGCGATGCG TTTGCCGGCA ACCGCATCCT CGGCGCCGCC
ACACTCGATC GCCTGCGACA CGGCGCCTAT CGTATCGTGC TCGATGGTGA CAGCTTCCGC
ACGCCCAGGC CATTGCCTGA ACCCGACCAG ACACGACTTG CGAAATCAAC CAAAAAAACG
CATCCTTGA
 
Protein sequence
MNPSPELNTT LKQLRLSGVL DSLEQRNRQA IDGQLAYTEF LAMLLHDEVA RRDQKKLRTR 
LARAGFAMGK TLETFDFDRL PNLNRTHIHD LATGRYIDEK VAILIAGPTG TGKSHLAQAL
GNCAARQGRD VVFATQTRLL NSLQAARATG TYERKLKQLA SVPVLIVDDF ALKPLRSPQD
EDFHDLIAER YETAATILTS NLDFSEWGDA FAGNRILGAA TLDRLRHGAY RIVLDGDSFR
TPRPLPEPDQ TRLAKSTKKT HP