| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0163 |
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| Symbol | |
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| ID | 6281707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 175813 |
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| End bp | 178281 |
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| Gene Length | 2469 bp |
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| Protein Length | 822 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642619737 |
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| Product | type IV secretion/conjugal transfer ATPase, VirB4 family |
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| Protein accession | YP_001893826 |
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| Protein GI | 187922184 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | [TIGR00929] type IV secretion/conjugal transfer ATPase, VirB4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGCCC AGCCGCAACT GATTGACGTA GCCGAACGCG AGGTCGTACT CGCGGACTTT
GTGCCGTTCT CGTCGCACGT CACCGACCAG GTCATCCGTA CGCGGGAAGG AGACTACCTG
CGCGTCTGGA AGATCGCGGG TATCGCCTTC GAGGCCGCCG ATCCGGGCGA CATCCTCGTG
CGTCACGAAG GATTCAACCA GCTCGTGCGC AGCCTGCCGG GTGGTCATGT TGGCCTGTGG
GCGCACCGGA TACGCCGGCG CGTGACCGAT CACTTCGCGA CACCCTACGG CAACCCGTTC
TGCCAGGAAC TCGCCACGCG TTATTACGCG AGCTTTGCCG GCTACCGGAT GATGGCCAAC
GAGCTCTACC TCACACTCGT GTACCGGCCG CACCGCACGC GCCTGGGGCG TCTTTTCAGC
CAGGCAGCCC GACGCACGCC CGATGATATC CGGCGCGCCC AGCATGAGGC CCTGAAGGTG
ATGGCGGAGC TCGCGGCGCA GGTGGAATCC GCCCTGAAGC CCTGGGATCC AGTGCCGCTC
GGTGTCTACC GCAAGCCGAT CCGTTACACG CAGCGACCCG TGCGCTTTTC GGCGGCGCTG
GAGTTCCTGG GGTATCTCGT CAATGCCGTA TGGGAGCCGG TGCCCGTTCC GTCTGGCCGC
ATCGCCGATG CACTGCCGAC GTCGCGACTG TTTTTCCGCA CCGAGAAGGT GGAGATCCGT
ATGCCGGGTT CGACCCGTTA CGCGGCGCTG CTCGACCTGA AGGACTACCC CGAGGAAACC
GAGCCGGGCA TGCTCGACGG TCTGCTTTAC GGTGACTTTG AGTACATCGA GACCCAGAGC
TTCACGATCC TCGACCGTCC CACGGCGAAG GAAGCGCTTG AGCGTCAGCG CAACCAGCTG
ATTGCGGGAG AGGACGTGGC GGTATCGCAG GTGGGCGCGA TGGACCAGGC GCTCGATGAC
CTGATCAATG GCGACTTCGT CCTCGGCGAA TATCACTACT CGCTGGCCGT CCTCGGTGAC
CGGCCGGACG AGGTCGCGCG ACACGTGGCG AAGGCGCGCA CGCAGCTCGC CGACGTCGGC
TTCCAGACGG CGCTTGTCGA TCTGGTGGCG GATGCTGCAT GGTTTGCGCA ACTGCCCGGC
AACTGGCGCT ACCGGCCCCG CGAGGCGAAG CTCACCTCGC GCAACGTCTG CGGCCTCGCG
AGCCTGCACA ACTTCGCGAC CGGCAAGCGC GACGGTAATC CTTGGGGCGA GGCGATCACG
ATCGTCAAGA CCCCGAGCGG CCAGCCGCTG TATCTGAACT TTCATGCGAC ACCGGAGAAG
AAGAACTCGG CAGACGAGAA GGCGCTCGCC AACACGCAGA TCATCGGCCA GGCGGGTGCC
GGCAAGACGG TGCTGGAACT CTTCCTGCTC GCGATGGCGA TGAAGTATGG CCTCACCGGT
GTCGTCTACG ACAAGGACCG GGGCACCGAA ATCGCGATTC GGGCAATGGG AGGCCGCTAC
ACGGTATTTC GACGGGGTGT CCCGACGGGA CTCAATCCCT TCCAGCTCGA GCCGGACGGG
ACGGTGCTGG ACTTCTGGGA GCGGCTGGTC CGCCGTCTGG TCGACATGGG CACGTTGCTC
TCGGCGAAGG ACGAACTCGA CATTTCGCGC GCCGTACGGG AAGTGGCGCG CATGGAGCGG
CCGCTGCGGC GTCTGTCGAT GGTCCGGCAG CTCCTGCCGG CCGTGGGCGA GAACAGCCTG
CATGCGCGGC TCACGAAGTG GTGCGCGGGC GGGCGTCTGG GCTGGGTGCT GGATAACCCG
TCGGATCTGC TCGATTTCAG CCAGAACCAT CTCTTCGGCT TCGACGATAC GGAACTGCTC
GACGATCCGG AGGTGTCGAC TCCGGTCACG ATGATCCTGC TGCACCTGAC AGAGAGCCTG
ATCGACGGCA GGCGCTTCGT CTATGTAATG ACGGAATTCT GGAAGCGTCT GGGAGATCCG
GTCTTTACGG ATTTCGCCAA AGACAAGCAG AAGACGATCC GCAAGCAGAA CGGTCTGGGC
ATCTTCGACA CGCAGTCGCC CGCCGATGTG TTGCGCAGTG ACATTGCGCG CGCACTGGTC
GAACAGACCG CGACATTCTT CTTCCTGCCG AATCCGCGCG CCGACCATGA CGACTATGTG
GACGGTTTCA AGCTGACCGA AGCCGAATTC AACATCGTCC GGTCCATGGG CGAGAACAGC
CGCCTGTTCC TGGTGAAGCA GGGCCACCGA TCGGCCATCG GCCGGCTGGA TCTCGCCGGG
CTCGGTGACG TGCTCGACGT GCTGTCGGGC ACCACGGACA ACGTCGAACT GCTTGACGGT
ATTCGTGCCG CAGTCGGCGA TGATCCCGCA GCGTGGCTGC CGGTATTCCA CGAGCAGCTG
GCGAGGCGTC GCGCGATGGA ATCGGCTGCA CGCGGCCGTG CTGCGCACGC GACGGGAGGT
TTGCGATGA
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| Protein sequence | MGAQPQLIDV AEREVVLADF VPFSSHVTDQ VIRTREGDYL RVWKIAGIAF EAADPGDILV
RHEGFNQLVR SLPGGHVGLW AHRIRRRVTD HFATPYGNPF CQELATRYYA SFAGYRMMAN
ELYLTLVYRP HRTRLGRLFS QAARRTPDDI RRAQHEALKV MAELAAQVES ALKPWDPVPL
GVYRKPIRYT QRPVRFSAAL EFLGYLVNAV WEPVPVPSGR IADALPTSRL FFRTEKVEIR
MPGSTRYAAL LDLKDYPEET EPGMLDGLLY GDFEYIETQS FTILDRPTAK EALERQRNQL
IAGEDVAVSQ VGAMDQALDD LINGDFVLGE YHYSLAVLGD RPDEVARHVA KARTQLADVG
FQTALVDLVA DAAWFAQLPG NWRYRPREAK LTSRNVCGLA SLHNFATGKR DGNPWGEAIT
IVKTPSGQPL YLNFHATPEK KNSADEKALA NTQIIGQAGA GKTVLELFLL AMAMKYGLTG
VVYDKDRGTE IAIRAMGGRY TVFRRGVPTG LNPFQLEPDG TVLDFWERLV RRLVDMGTLL
SAKDELDISR AVREVARMER PLRRLSMVRQ LLPAVGENSL HARLTKWCAG GRLGWVLDNP
SDLLDFSQNH LFGFDDTELL DDPEVSTPVT MILLHLTESL IDGRRFVYVM TEFWKRLGDP
VFTDFAKDKQ KTIRKQNGLG IFDTQSPADV LRSDIARALV EQTATFFFLP NPRADHDDYV
DGFKLTEAEF NIVRSMGENS RLFLVKQGHR SAIGRLDLAG LGDVLDVLSG TTDNVELLDG
IRAAVGDDPA AWLPVFHEQL ARRRAMESAA RGRAAHATGG LR
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