| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_7497 |
|---|
| Symbol | |
|---|
| ID | 6249081 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010627 |
|---|
| Strand | - |
|---|
| Start bp | 271301 |
|---|
| End bp | 271810 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642599083 |
|---|
| Product | AsnC family transcriptional regulator |
|---|
| Protein accession | YP_001863489 |
|---|
| Protein GI | 186474518 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.000799666 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCAA ATCTTCGACG ACTCGATCGT ATTGACGTCT GCATCCTGAA CGAACTTCAG
CACAATGCAC GGATTACCAA TGCTGAACTG GCGCGTGCGG TCAACCTCTC TCCGACACCC
TGCTTCAACC GTGTGCGTGC ACTTGAGCGG CTAGGCCTCG TCAGGCAGCG GGTTACGCTG
CTGGACTCTG AAGTGCTTGG CCTTCGCATT AATGTGTTCA TTCAAGTTAG CCTCGAAAAG
CAGGTCGAAT CGGCACTTCA ACGTTTTGAA GAGGCCATAT CCTTACGCGA AGAGGTTATG
GAGTGCTATC TAATGTCGGG CGATGCGGAC TACCTCCTGC GTGTGGTAGT CCCGGACATG
CATACACTTG AGCGCTTCAT CATAGAGCGT CTGACGACCA TCCCGGGTGT GTCAAACATC
CGCTCGAGTT TTGCATTAAA ACAGGTGCGC TACAAGACCG CTTTGCCGCT GCCAGCTCTC
GGCCTTACGC TCGCCGGGCT AGACGAATGA
|
|---|
| Protein sequence | MSANLRRLDR IDVCILNELQ HNARITNAEL ARAVNLSPTP CFNRVRALER LGLVRQRVTL
LDSEVLGLRI NVFIQVSLEK QVESALQRFE EAISLREEVM ECYLMSGDAD YLLRVVVPDM
HTLERFIIER LTTIPGVSNI RSSFALKQVR YKTALPLPAL GLTLAGLDE
|
|---|
| |