Gene Bphy_6879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_6879 
Symbol 
ID6248399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010625 
Strand
Start bp1516150 
End bp1517043 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content61% 
IMG OID642598534 
ProductGntR family transcriptional regulator 
Protein accessionYP_001862936 
Protein GI186471618 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0423677 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGACA GATCCATTGC GACCCAGATT GTTGAACTGA TCAAGACAGA AGGACTCGAC 
GCCGGCGCGC ATCTGCCCGC GCAGATGCTG GCCGACCGTC TGCGCGTTTC ACGCTCGCCC
GTCAACGAAG CGCTTGCACT GCTGCACGAA AAAGGCATCC TGACGCGCGA GAAGAATCGC
GGCTTCTTCG TTGCCAAGCC TGTTGTCGAG CCTCTGGCGG ATGTCGTCGG CGAGTTGGGC
CTCGCGGAAA CCGATCTCGT GACGAGCGTG TATTTCCAGA TCGCAGATGA CCGACTGAAA
GGCGAATTGC CGGATGAGTT TTCCGAGCAA CTGATCCGCA ACCGCTACAG CTTGACGAGC
GCGCAGCTGA CGACCGTGCT TGGACGCATC GCGCAGGAAG GCTGGGCCGA GCGCAAGCCC
GGCTACGGCT GGCAGTTCTC GCCGATGCTG ACCACGCCCG ACAGTCTGCT CAAGTCGTAC
CGTCTGCGTC TCGCACTCGA ACCCGCTGCG TTGCTGGAGC CGGGTTACCG CCTGGAGCGC
AAGGTGCTCG AACGGTGTCG CGATGTCGAG AAGCATCTGC TGGCGGGCGG TATCGAAACC
GATACGGCGG ACCAGTTGCA CGATCGCGGC GTGCGCTTTC ACGAATCGCT GGTCGAAGCT
TCAGGAAACA GTTTTTTCAT CGACACGATC AGACGCGTCA ATCGCGTGCG ACGGCTGCTG
TCGTATCGCT CGATGCAGCA TCGCGAGCGC TATGTCGAAC ACGCGAAGCA GCATCTGCAT
CTGCTGGAAC TGCTCGAACG CGAGCGCAAC GAAGAGGCCT CGGAGGCGAT GCGCGAGCAC
TTGCTGCATA CGCTCGACGC GCTCTCGCGC ATCAGTGAGA TTCTTGAACC TTAA
 
Protein sequence
MIDRSIATQI VELIKTEGLD AGAHLPAQML ADRLRVSRSP VNEALALLHE KGILTREKNR 
GFFVAKPVVE PLADVVGELG LAETDLVTSV YFQIADDRLK GELPDEFSEQ LIRNRYSLTS
AQLTTVLGRI AQEGWAERKP GYGWQFSPML TTPDSLLKSY RLRLALEPAA LLEPGYRLER
KVLERCRDVE KHLLAGGIET DTADQLHDRG VRFHESLVEA SGNSFFIDTI RRVNRVRRLL
SYRSMQHRER YVEHAKQHLH LLELLERERN EEASEAMREH LLHTLDALSR ISEILEP