Gene Bphy_6553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_6553 
Symbol 
ID6248090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010625 
Strand
Start bp1137786 
End bp1138487 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content64% 
IMG OID642598225 
ProductGntR family transcriptional regulator 
Protein accessionYP_001862627 
Protein GI186471309 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.697702 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAGA CAACACAGCA GGCGATTGTG CAGACGCTGC GCGAGAGGAT TCTGTCGGGC 
GAGCTGGCAC CCGGCCAGCG TCTCGTCGAA GCGCAACTCG CGCAGTGGCT CGGCGTGTCC
CGCACGCCGC TGCGCTACGC ATTTAGCGTG CTGGCCGGCG AAGCGCTGCT CGAACGGTCG
GGTGCGCGAG GTTATGTCGT GCGACGGTTC GGCGTGCGCG ACGTATTGAA CGCGATAGAC
GTGCGCGGCG TGCTGGAAGG TCTGGCCGCA CGCACCGTCG CGGAAAGCGG CGTGCCGGCC
GCGCTTGCTG CATCACTGAA CGCGTGTCTA CGTGAAGGCG ACGACATTTT CGGCGCGGGC
GCGTTGAAGG AGGGCGACGA CGTGCGCTAC GCGGAGATGA ACGGCCGCTT CCATGCGCTG
ATCGTCGAAG CCGCGCAAAA CGCCGCGATC AATGCTGCGT TGAGTCTCAA CGACAAGATT
CCGTTCGTCG CGCCATCAAC GATCGCCTTC GACGAATCCG CGCGCGAACG TCAGTTCGCG
ATGCTCAACT ACGCGCATCG TCAGCATCAT GCCATCGTCG GCGCGCTCGT CAACGGCGAA
GGCGCGCGTG TCGAAGCGCT GATGAAGGAA CATACGCACA TATCGAAGGA AAGCCTCAAT
CTGTCGTTGC CCGCATTGCG GCTGATCGCG GGCGCGGCAT GA
 
Protein sequence
MNETTQQAIV QTLRERILSG ELAPGQRLVE AQLAQWLGVS RTPLRYAFSV LAGEALLERS 
GARGYVVRRF GVRDVLNAID VRGVLEGLAA RTVAESGVPA ALAASLNACL REGDDIFGAG
ALKEGDDVRY AEMNGRFHAL IVEAAQNAAI NAALSLNDKI PFVAPSTIAF DESARERQFA
MLNYAHRQHH AIVGALVNGE GARVEALMKE HTHISKESLN LSLPALRLIA GAA