Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_6188 |
Symbol | |
ID | 6247744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010625 |
Strand | + |
Start bp | 744932 |
End bp | 745711 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642597879 |
Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
Protein accession | YP_001862281 |
Protein GI | 186470963 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.284578 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0208295 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACTACG AAGCCCAGCC CGTCGCGACA GTCAACGCAG TGCCGCTGCA TGCGCCGGGC GAAGCGCTGC CGGTTAAAAC GCTGCGCCAA CGCGCCTGCA CCGAACTGCT GCGCCAGGCC GCAATCCGGG AAGGACTGCT CAACGTGCAC GATGTGCTCG CGTCCGACGG CACGCCGGGC ACGGCGACTG TCGACGCGAT CGAAAGGCTG CTCGAGCACG CGCTGCGTGT GCCCGAACCC GACGAGCACG CCTGCCGGCG TTACTACGCC GCCAATCCAG GCCGCCACGC GCCCGGTGAA CGGGTCCACG CGAGACACAT CCTGTTCGCG GTGACGCCCG GCGTAGATAT CGAGGCGCTG CGACGGCTCG CCGAAGCATC GCTCGTCGAT CTGAGATGCG ACGCAGTCGA GCATGGCGAG CGCTTCGCTC GCGCGGCGAA GGAGCTGTCG AATTGCCCGA CGGGCGACGC AGGCGGCGAG CTGGGCTGGT TCACGGCGGC CGAATGTGTG CCGGAGCTGG CACGCGAGTT GTTCGGCCTG CCGTATGTCG GCGTGCTGCC GCGATTGGTG GCAACGCGGT TTGGTTTTCA CATTGTTGAC GTGCTCGCAC GTGAGCGGGC GAATACGCCG CCGTTCGAGA CTGTACGCGC GGCGATCGCG CAGACGCTGC GCCAGCACGC TTTTGCAAAC GCATTGCGCC AGTATGTTAG CCTTCTCGCC GCTCAGGCAG AGCTCTGCGG TGTCGAGCTC GACGGCACCG CCACGCCACT CGTGCAGTGA
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Protein sequence | MYYEAQPVAT VNAVPLHAPG EALPVKTLRQ RACTELLRQA AIREGLLNVH DVLASDGTPG TATVDAIERL LEHALRVPEP DEHACRRYYA ANPGRHAPGE RVHARHILFA VTPGVDIEAL RRLAEASLVD LRCDAVEHGE RFARAAKELS NCPTGDAGGE LGWFTAAECV PELARELFGL PYVGVLPRLV ATRFGFHIVD VLARERANTP PFETVRAAIA QTLRQHAFAN ALRQYVSLLA AQAELCGVEL DGTATPLVQ
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