| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6101 |
|---|
| Symbol | |
|---|
| ID | 6247666 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010625 |
|---|
| Strand | - |
|---|
| Start bp | 646823 |
|---|
| End bp | 647731 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642597802 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_001862204 |
|---|
| Protein GI | 186470886 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0189492 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.808784 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAGTAC TGGTTACAGG CGGCAGCGGT TTTCTGGGGG CGTGGATCAT GCGGCGGCTG
CTTGCACATG GCATCGAATG CGTCGCGTTC GATCTGCAGG CGAAACCGCA ATTGCTGCAC
GCGCTAGCGC CGGAACAGGC GGACACGGTC CAATGGCGCA CGGGCGATAT CGCGCAAGCC
GCCGATGTCG CACGCGCACT GGACGGCTGC AATGCCGTGA TTCATCTGGC GGGCATCCTG
ACCCCCGACT GCGCGGCCAA CCCCGTGCGC GGCGCGCAGA TCAACCTGAT CGGCACGTTG
AACGTTTTCG ACGCAGCGCG CACGGCGCGT CTGCCGCGCG TGCTCTATGC CAGCAGCGCC
GGCGTGTTCG GTCCCGACGA TGGCGCGATG CCGCATCCGC AAACGCACTA CGGCGCGTTC
AAGCTCGCCT GCGAAGGCTC CGCGCGCGCG TACTGGAATG ACCACGGCAT CGCGAGCGTC
GGCTTTCGCC CGCTGGTCGT GTATGGCGCG GGGCGCGAGA CGGGCTCGAG CGCCGGTCCG
AGCCTCGCGT GCCGCGCAGC GGCACTCGGC GAGCAGTACA CGATGCCGTT CACAGGTTCG
ACGGGCTTCG TGTTCGCCGA CGATGTCGCG GCCGCGTACG AGGCGGCCTT GCTGCGCGAC
GTAGAAGGTG CGCACGCGTT CACGCTCGCA GGCGAAATCG CTTCCGTGCA GACGGTGATC
GACAGGATCG GCACGATCGT GCCGGACGCG CGCATCGATG CAGCGGGCGC GGCGCTACCC
ATCGCGACTG CATTTCCGCG CGATCCCGCC CTGGAGCGCC TGTTGCCGAA CCTGCCGCAG
ACCTCGCTCG AAGCAGGCTT GCGGCAGACG GTGGCGTTCT ACCGTCACGC ACTCACGACG
CACCCCTGA
|
|---|
| Protein sequence | MRVLVTGGSG FLGAWIMRRL LAHGIECVAF DLQAKPQLLH ALAPEQADTV QWRTGDIAQA
ADVARALDGC NAVIHLAGIL TPDCAANPVR GAQINLIGTL NVFDAARTAR LPRVLYASSA
GVFGPDDGAM PHPQTHYGAF KLACEGSARA YWNDHGIASV GFRPLVVYGA GRETGSSAGP
SLACRAAALG EQYTMPFTGS TGFVFADDVA AAYEAALLRD VEGAHAFTLA GEIASVQTVI
DRIGTIVPDA RIDAAGAALP IATAFPRDPA LERLLPNLPQ TSLEAGLRQT VAFYRHALTT
HP
|
|---|
| |