| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6050 |
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| Symbol | |
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| ID | 6247620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | + |
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| Start bp | 594624 |
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| End bp | 596141 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642597756 |
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| Product | lytic transglycosylase catalytic |
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| Protein accession | YP_001862158 |
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| Protein GI | 186470840 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.656585 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00000979429 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGTATCG CGCGTGCGTG GCTGGTATCA ACCCTGTTCG GAGTTGCACT CTGCGTGTGG
TGTGCGCTTT GCACTGCCGT CCAGCCGGTG TCTGCGCGAT CAGCGGCGGC GCCCGCGTCA
GCGGCTTCCG CGCCGGCCGC CGCGAATGCG GCGCGGCGGA TCGATCTGAC CAACAAGCCT
TGGCGAGGCG ATTTTGACGC GATGCTTCAG CGCCGCATGA TTCGCGTTCT CGCGCCCTTT
AGCCGCACGT TGTACTTCAA TGACCGTGGA CACGAGCGCG GAGTGGCGGC GGACACCGTG
CGCGACTTTG AACGATTCGT CAACAAGACC TACGCCGATC GCCTCGGCAA GCGTCCCGTC
ACCGTCGTCA TGATCCCGAC GACACGCGAC CGGCTGCTCC CCGGCCTCGC AGAAGGCATT
GGCGATATTG CAGTCGGCAA CCTGACGGTG ACCGATGATC GCCTGAAGCA GGCCGACTTC
GTTACTGCAC ATGCGCTCAA GCCAACGCGC GAACTCGTTT TGACGGGCCC CAAGTCACCT
GCGTTGTCCA CCCTCGACGA CCTCAGCGGC AAGACAGTCG ACGTTCGCCG CCATAGCAGC
TATTACGAGA GCCTGGTTGC CCTGAATACC CGCTTCCGGC AAGCCGGCAA GCAGCCGGTG
CGGATCGTGC TGCTGCCGGA CGCGCTCGAG GATGAGGATG CGATGGAGAT GCTGAACATC
GGCCTGCTCC AGATACTCAT CGTCGATGAC TGGAAGGCGC GCATGTGGGC GCAGATGCTT
CCGCAAATCA AGGTGCACGA AAATATCGCG GTGCGCGAGG GAGGCGTCAT TGGCTGGGCC
ATTCGCAAGA ACAGTCCTCA GTTGCAGGCG GTGATCAGCA ACTTCTATGA GAAGTTCATC
AGGAAGCATA GCGTAGCGGA GATCCGCCTG AAGCAGTACG TGCAGGGTGT CAAGCAGATC
CACAACAACA TGGAAAGCGC CGAGCTGAAG CGATTCAAAC AGACCGTGGC ATTCTTCGAG
AAGTACGGCC AGCAATACGA TTTCGATCCG TTGATGCTCG CGGCCCAGGG ATTTCAGGAA
TCGCAACTCA ATCAGGATGC GAAGAGCCGG GTGGGGGCGG TCGGCATCAT GCAACTGATG
CCGACCACCG GCAAGGAACT CAACGTTGGA GACATCAAGG TTGCAGAGTC GAACATTCAT
GCTGGCGCGA AGTATCTCGA TCAGCTGATG ACCCGTTATT TCAAGGATGC TCATTTTTCC
GAGGTCGACC GGCCGCTCTT CGCCTTCGCC AGCTATAACG CCGGACCGGG AAACATTGCG
AAGATGCGCA AGGAGGCTGC GACCCGCGGC CTGGATCCTG ACGTCTGGTT CAACAACGTC
GAAGTCGTGG TGGCCGAGAA GATCGGCATC GAGACGACCA CTTATGTGCG AAACATCTAC
AAGTACTACG CGTCCTATCA CCTCCTCAAG GAAGCGCAGG CGCAGCGGAC GCGTACGGTT
CAGCAACTGC GCCGCTGA
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| Protein sequence | MRIARAWLVS TLFGVALCVW CALCTAVQPV SARSAAAPAS AASAPAAANA ARRIDLTNKP
WRGDFDAMLQ RRMIRVLAPF SRTLYFNDRG HERGVAADTV RDFERFVNKT YADRLGKRPV
TVVMIPTTRD RLLPGLAEGI GDIAVGNLTV TDDRLKQADF VTAHALKPTR ELVLTGPKSP
ALSTLDDLSG KTVDVRRHSS YYESLVALNT RFRQAGKQPV RIVLLPDALE DEDAMEMLNI
GLLQILIVDD WKARMWAQML PQIKVHENIA VREGGVIGWA IRKNSPQLQA VISNFYEKFI
RKHSVAEIRL KQYVQGVKQI HNNMESAELK RFKQTVAFFE KYGQQYDFDP LMLAAQGFQE
SQLNQDAKSR VGAVGIMQLM PTTGKELNVG DIKVAESNIH AGAKYLDQLM TRYFKDAHFS
EVDRPLFAFA SYNAGPGNIA KMRKEAATRG LDPDVWFNNV EVVVAEKIGI ETTTYVRNIY
KYYASYHLLK EAQAQRTRTV QQLRR
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