Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_6024 |
Symbol | |
ID | 6247594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010625 |
Strand | + |
Start bp | 565973 |
End bp | 566806 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642597730 |
Product | shikimate 5-dehydrogenase |
Protein accession | YP_001862132 |
Protein GI | 186470814 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0667922 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.533551 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGACC AGTACGCCGT GATCGGCAAT CCGATCGGAC ACACCAAATC GCCCCTGATT CATGGACTCT TCGCAGAGGA GACGCAGCAG GACATGGCTT ATACGGCCAT CGAAGGGCCG CTCGAACCCG AGCAGGCTTT TGCCGAGAGG GTTCGCGCGT TCGCCCTGGC GGGTGGCAAG GGAATGAACG TCACCGCGCC CTTCAAGCTA AAGGCCTTTG CGATGGCCGA CGAACGCAGC GAGAGAGCGG AGCTTGCGGG CGCCGTCAAC GCGATGAAGT TCGAGGGTGG CCGCATCATT GCCGAGAACT TCGACGGCAT CGGGCTCGTG CGTGATATCG AGGTCAATCT CGGCCTGCCG ATGGCGGGCA AGCGGGTGCT GCTGCTCGGC GCGGGCGGCG CCGCGCGCGG CGCGCTGCTG CCTTTTCTGG CGGCGCGGCC AGAAAGCCTG GTGATCGCCA ATCGCAATGT CGCGAAAGCC AGGGATCTCG CGGCGCAGGT CGGCGCGCAT GGCGCGCTTC ACGCCTGCGG TTATGGCGAT CTGCAAGCAC TGGGGCGATT CGACCTGGTC GTGAACGCGA CGTCGGCGAG CCTCTCGGGC GACCTGCCGC CCGTTCCTCC CAGCGTCTTC AGTCCTGAGG GCGCCGCCTA TGAACTTGCC TATGGGAAAC GTTTGACGCC ATTTCTGCGG CTTGCACGCA ACGCGGGCGT ATTCACCATC GCGGATGGCG TGGGCATGCT GGTCGAACAG GCGGCGGAAG CCTTCGACTG GTGGCGCGGC GTTCGGCCTG CAACGCGGGC GGTGATCGAG CGGCTCACGG TGCCGCTCGA ATGA
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Protein sequence | MTDQYAVIGN PIGHTKSPLI HGLFAEETQQ DMAYTAIEGP LEPEQAFAER VRAFALAGGK GMNVTAPFKL KAFAMADERS ERAELAGAVN AMKFEGGRII AENFDGIGLV RDIEVNLGLP MAGKRVLLLG AGGAARGALL PFLAARPESL VIANRNVAKA RDLAAQVGAH GALHACGYGD LQALGRFDLV VNATSASLSG DLPPVPPSVF SPEGAAYELA YGKRLTPFLR LARNAGVFTI ADGVGMLVEQ AAEAFDWWRG VRPATRAVIE RLTVPLE
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