| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5902 |
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| Symbol | |
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| ID | 6247474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | - |
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| Start bp | 422312 |
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| End bp | 423613 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642597610 |
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| Product | ABC spermidine/putrescine transporter, periplasmic ligand binding protein |
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| Protein accession | YP_001862012 |
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| Protein GI | 186470694 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.950335 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACG ACAAGACGGC GGCAGCCGTG CAGCACGTGG AAGCAGAGAC CGTCGGCAAG
GGTATGTCGC GCCGCACGTT CATCAAGGGC GCGGTCGCGG CAGCAGGCAT CACGGGTTTT
CCGTACGTCC ATGCACAGGA GAAAATCACG CTGCGCTACC TGGGCACGGC CGTCAACCAG
AGCGCGGAAA TCGCGAAAAA GTTCAAGGAA GACACGGGCA TCGAGATTCA ATACATCCCC
GTCACCACCG ACGACGTAAC CAAGCGCATC ATCACCCAGC CCAATTCATT CGATATCGTC
GACACCGAGT ACTTCGCGCT CAAGAAGCTC ATCCCCGCGG GTACGCTCGC GGGCATGGAC
GCGAAGCGCA TCAAACTCGC CGACAAGATC ACCCCCGTGC TGACGAAAGG CGAAGTGGAC
GGCAAGAAGA TAGGCGACCA GGGCACGGCG CCGAAGAAGG TCATGTTCCT CAAAGGCGCG
CGCTCGACGG AGTTCTCAGC CATGCCGACG GAATGGATGA CGCTGATTCC GACCACTTAC
AACGCCGACA CACTGGGCAT TCGGCCCGAT CTCATCGCAC GCCCCGTGAC GACGTGGGCG
GACCTGCTCA ATCCGCAATT CAAGGGCAAG GCTGCGCTGC TCAATATTCC CGCTATCGGC
ATCATGGATG CAGCGATGGC GATAGAAGCG ATGGGACGCG TGAAGTACGG CGATAAAGGC
AACATGTCCA AGGCGGAAAT CGACCAGACC ATCAAGATTC TGATCGAAGC AAAGCGCGCA
GGCCAGTTCC GCGCATTCTG GCGCGACTTC AACGAGAGCG TGAACCTGAT GGCTTCGGGC
GAGGTCGTGA TCCAGTCCAT GTGGTCGCCC GCCGTCACGA AAGTGCGCAC GATGGGCATT
GCCTGCAAGT TCCAGCCGCT CAAGGAAGGT TACCGCTCAT GGGCGTCGGG CTTCGGCTTT
CCGCGCTCCC TGCAGGGCAA GAAGCTCGAT GCCGCCTACG AATTCGTCAA CTGGTTTCAG
GACGGCTGGG CAGGGGCTTA TCTGATGCGT CAGGGCTATT ACCCAGGCGT CACGGAAACG
GCGAAGTCGC ATATGCAGGC CTACGAATGG GATTACTGGA TGGAAGGCAA ACCCGCTGCA
CAGGACATCA AGGCACCCGA CGGCCAGTTA CTCGAGAAAG CGGGGAGCGT GCGCGACGGC
GGATCGTACA GTCAGCGTAT GGGCGCCATT GCCTGCTGGA ACGCCGTGAT GGACGAGAAC
ATCTACATGG TGCAGAAGTG GAACGAGTTC ATCGCCGCAT GA
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| Protein sequence | MNDDKTAAAV QHVEAETVGK GMSRRTFIKG AVAAAGITGF PYVHAQEKIT LRYLGTAVNQ
SAEIAKKFKE DTGIEIQYIP VTTDDVTKRI ITQPNSFDIV DTEYFALKKL IPAGTLAGMD
AKRIKLADKI TPVLTKGEVD GKKIGDQGTA PKKVMFLKGA RSTEFSAMPT EWMTLIPTTY
NADTLGIRPD LIARPVTTWA DLLNPQFKGK AALLNIPAIG IMDAAMAIEA MGRVKYGDKG
NMSKAEIDQT IKILIEAKRA GQFRAFWRDF NESVNLMASG EVVIQSMWSP AVTKVRTMGI
ACKFQPLKEG YRSWASGFGF PRSLQGKKLD AAYEFVNWFQ DGWAGAYLMR QGYYPGVTET
AKSHMQAYEW DYWMEGKPAA QDIKAPDGQL LEKAGSVRDG GSYSQRMGAI ACWNAVMDEN
IYMVQKWNEF IAA
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