Gene Bphy_5801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5801 
Symbol 
ID6247375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010625 
Strand
Start bp308393 
End bp309178 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content63% 
IMG OID642597511 
Productcarboxymuconolactone decarboxylase 
Protein accessionYP_001861913 
Protein GI186470595 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.558099 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.179453 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAGG AACCGGCGCG TGCGCAACGC GAGCCGCAGC AGATCAAGGA CGATTTCATG 
CGCGTGCACG GCGTCTGGAA TGCCGCGTGG GACAGCATGC TGCGACTCGA CGCGGGTTTC
GTCGACGCGT ATGTGCAGTT CTCTGCGGTG CCTCAGCGCA GGAATCATCT CGACGACAAG
ACACGCGCGT TCATCGCGCT CGCGGCCGAT GCGTGCGCGA CGCAGCTGTA TGGCCCCGGC
GTCGCGCATC ATCTGGAGCG CGCCCTCGTG TTTGGCGCGA CGCGCGAGGA ACTGATGGAA
GTGCTCGAAC TGATCAGCAC GATCGGCATT CACACCAGCA ACGTCGGCGT GCCCGTGCTG
CTCGAAGTGC TCGAAGAAGA AGGGTTGCGC GCCGGGCCCG CGCCGCTCGA CGAACGCCGC
CGCGTGCTCA AGGAAGCGTT CGAAAAGAAT CGCGGCTACT GGCATCCGAC ATGGGAAGGG
CTGCTCGAGC TCGATCCCGA TCTGTTCGAA GCGTATGTCG AATTTTCATC GGTGCCGTGG
CGCACGGGCG TGTTGAGTCC GAAGATCAAG GAGTTCATGT ACTGCGCGTT CGACGCATCG
TCCACACACC TGTACGTGAC TGGCCTCAAG CTGCACATGC GCAACGCACT GCGTTACGGC
GCGACGGCGG ACGAACTGAT GGAACTGCTG GAGATCGTCA GCACGACGGG CATTCATGGC
GCCGAACTCG GCGCGCCGTT GCTGGAAGCG GCCCTCGCGA AGCGGTACGC GGCTGCCGAT
GCCTAA
 
Protein sequence
MKQEPARAQR EPQQIKDDFM RVHGVWNAAW DSMLRLDAGF VDAYVQFSAV PQRRNHLDDK 
TRAFIALAAD ACATQLYGPG VAHHLERALV FGATREELME VLELISTIGI HTSNVGVPVL
LEVLEEEGLR AGPAPLDERR RVLKEAFEKN RGYWHPTWEG LLELDPDLFE AYVEFSSVPW
RTGVLSPKIK EFMYCAFDAS STHLYVTGLK LHMRNALRYG ATADELMELL EIVSTTGIHG
AELGAPLLEA ALAKRYAAAD A