Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_5801 |
Symbol | |
ID | 6247375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010625 |
Strand | + |
Start bp | 308393 |
End bp | 309178 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642597511 |
Product | carboxymuconolactone decarboxylase |
Protein accession | YP_001861913 |
Protein GI | 186470595 |
COG category | [S] Function unknown |
COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.558099 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.179453 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGCAGG AACCGGCGCG TGCGCAACGC GAGCCGCAGC AGATCAAGGA CGATTTCATG CGCGTGCACG GCGTCTGGAA TGCCGCGTGG GACAGCATGC TGCGACTCGA CGCGGGTTTC GTCGACGCGT ATGTGCAGTT CTCTGCGGTG CCTCAGCGCA GGAATCATCT CGACGACAAG ACACGCGCGT TCATCGCGCT CGCGGCCGAT GCGTGCGCGA CGCAGCTGTA TGGCCCCGGC GTCGCGCATC ATCTGGAGCG CGCCCTCGTG TTTGGCGCGA CGCGCGAGGA ACTGATGGAA GTGCTCGAAC TGATCAGCAC GATCGGCATT CACACCAGCA ACGTCGGCGT GCCCGTGCTG CTCGAAGTGC TCGAAGAAGA AGGGTTGCGC GCCGGGCCCG CGCCGCTCGA CGAACGCCGC CGCGTGCTCA AGGAAGCGTT CGAAAAGAAT CGCGGCTACT GGCATCCGAC ATGGGAAGGG CTGCTCGAGC TCGATCCCGA TCTGTTCGAA GCGTATGTCG AATTTTCATC GGTGCCGTGG CGCACGGGCG TGTTGAGTCC GAAGATCAAG GAGTTCATGT ACTGCGCGTT CGACGCATCG TCCACACACC TGTACGTGAC TGGCCTCAAG CTGCACATGC GCAACGCACT GCGTTACGGC GCGACGGCGG ACGAACTGAT GGAACTGCTG GAGATCGTCA GCACGACGGG CATTCATGGC GCCGAACTCG GCGCGCCGTT GCTGGAAGCG GCCCTCGCGA AGCGGTACGC GGCTGCCGAT GCCTAA
|
Protein sequence | MKQEPARAQR EPQQIKDDFM RVHGVWNAAW DSMLRLDAGF VDAYVQFSAV PQRRNHLDDK TRAFIALAAD ACATQLYGPG VAHHLERALV FGATREELME VLELISTIGI HTSNVGVPVL LEVLEEEGLR AGPAPLDERR RVLKEAFEKN RGYWHPTWEG LLELDPDLFE AYVEFSSVPW RTGVLSPKIK EFMYCAFDAS STHLYVTGLK LHMRNALRYG ATADELMELL EIVSTTGIHG AELGAPLLEA ALAKRYAAAD A
|
| |