| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5776 |
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| Symbol | |
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| ID | 6247350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | + |
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| Start bp | 281686 |
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| End bp | 283209 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642597486 |
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| Product | PDZ/DHR/GLGF domain-containing protein |
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| Protein accession | YP_001861888 |
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| Protein GI | 186470570 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.843261 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTTCACT CGACCCTGTC CCAGACCTGG CTTTGCACTG CCGTGACAGC GGCGTGTCTC
GCCGCTTATT CCACCACCGA TGCGGCTACG AATGCAACGC ATACGGCCGC TGCCTCTTCG
CCGGCGCCCG CATCGGCATC TGCAAAAGAG ACGCGAACCG CACCCGAAAA AACGCATGCG
CCGATGGACT TCCCAGCGAT TGTCGAGCGC TACGGACCGG CCGTCGTGAA CATCCGCGCA
ATCTTGCCGG ACAAGCCGCT GGCGGCCTCC GCGGTGCCAG CAGCACCTGC ACCCGCGTCG
GGCACGAGTT CTGAAATCAT CGACGGCGAC GACCCGTTGT TCGCGTTCTT CCGGCAGGCG
ATGCCGCAGG CGCAAGATGG CCAGAGCAGC TCGCCGCGTG CGATTTCGGG CGTGGGGTCG
GGGTTCATCG TCAGCCCGAA CGGGTTGATT CTGACGACGG CGCATGTTGT CGACGGATCG
GAAGACGTGA CGGTGCGCCT CACCGACCGG CGCGAGTTCA AGGCGAAAGT GGTAGCCGTC
GATACGCAGA GCGACGTCGC GGTGATCCAG ATCGACGCAA CCAGACTGCC CGTCGTCAAG
CTCGGCGACT CGACGCGCGT GCGCGTCGGC GAGCAGGTGC TGACGATTGG CTCGCCGGAC
AGCTATCAGA ACACGGTAAC GGCGGGGATC GTCAGTGCAA CGTCGCGTAC GTTGGCCGAC
GGCACGAAGT TTCCATTCTT CCAGACCGAC GGCGCATTGA ACCCGGACAA TTCGGGCGGC
CCGGTGTTCA ACCGCGCCGG CGAAGTGGTC GGCATCCACG TGCAGGTCTA TGCCGACGGC
GACCGCTTGC AGAGCCTGAC GTTCGCGATA CCGATCAACA TGGCGAACAA GGTACGCGCG
CAGCTGCAGA CGCAAGACAA GGAAGCGCGC GGCGGCAGCT TCGGCATGCA GGTGCAGGAC
GTCGATCCCG GCCTTGCGGG TGCGTTCGGC CTGCCGCGCG CAGCGGGCGC GCTCGTGATT
GCCGTCGAAC CCGGCAGTCC CGCAGCGACG GGCAAACTGA AAGCGGGCGA CGTGATCGTG
CAGGTCGGCG ATAAGCCAAT CGAGCATGCG GCCGATCTTA CCGATCAGGA TGCCGATCTG
CAGGATGGGG CCAAAATTCC CGTCAAGGTG ATTCGCAATC GCAAGCAGAT CACGGCGATG
ATCGGCGGGA CGGCATCTGC GCAGCCCGAG ACTGCGGGCG CAACGGATGA CGGCGCGCTC
GATCATCTCG GTCTCAGCAT GCACCCGCTG ACGGACGACG AACGGCGCAC CACGGGACTG
CCGCAGGGCC TGATGGTCGA CGACGTATCG GGAACGGGAG GCACGGCCGG CATCAAGCCG
GGCGATGTGG TGCTGTCGCT GAACGGCACC CTGGTCGCGT CGCAGGACGA ACTTGCATCG
CTTGCGGCGA AGGCGGGCAA GAAGGCAGCG TTGCTGATCC AGCGTAATCA CGCGCGCAGC
TTCGTGTCCG TCAATCTCAA GTAA
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| Protein sequence | MLHSTLSQTW LCTAVTAACL AAYSTTDAAT NATHTAAASS PAPASASAKE TRTAPEKTHA
PMDFPAIVER YGPAVVNIRA ILPDKPLAAS AVPAAPAPAS GTSSEIIDGD DPLFAFFRQA
MPQAQDGQSS SPRAISGVGS GFIVSPNGLI LTTAHVVDGS EDVTVRLTDR REFKAKVVAV
DTQSDVAVIQ IDATRLPVVK LGDSTRVRVG EQVLTIGSPD SYQNTVTAGI VSATSRTLAD
GTKFPFFQTD GALNPDNSGG PVFNRAGEVV GIHVQVYADG DRLQSLTFAI PINMANKVRA
QLQTQDKEAR GGSFGMQVQD VDPGLAGAFG LPRAAGALVI AVEPGSPAAT GKLKAGDVIV
QVGDKPIEHA ADLTDQDADL QDGAKIPVKV IRNRKQITAM IGGTASAQPE TAGATDDGAL
DHLGLSMHPL TDDERRTTGL PQGLMVDDVS GTGGTAGIKP GDVVLSLNGT LVASQDELAS
LAAKAGKKAA LLIQRNHARS FVSVNLK
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