| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5641 |
|---|
| Symbol | glcF |
|---|
| ID | 6247147 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010625 |
|---|
| Strand | - |
|---|
| Start bp | 119078 |
|---|
| End bp | 120349 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642597359 |
|---|
| Product | glycolate oxidase iron-sulfur subunit |
|---|
| Protein accession | YP_001861761 |
|---|
| Protein GI | 186470443 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0247] Fe-S oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.636346 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACGA ATCTCGACTC TCACGCGAAA GCCCTGCCCG ATGCCGAAGA AGCGGAAAGC
ATCCTGCGTT CATGCGTGCA TTGCGGCTTT TGCAACGCGA CGTGCCCGAC GTATCAACTG
CTCGGCAACG AACTCGACGG ACCGCGCGGT CGCATCTATC TGATCAAGCA ACTGCTCGAA
GGCGAGCCCG TCAGCGCCAG GACGCAATTG CATCTGGACC GCTGCCTCAC GTGCCGCAAT
TGCGAAACGA CGTGCCCGTC GGGCGTCACC TATCACCGGC TGCTCGATAT TGGACGCGCG
GAACTCGAGC GCCGCATCGA GCGGCCCATC GGCGAGCGCT TGACGCGTAA AGGCTTGCGC
ACGGTGATCC CGCGCCCCGA CGTGTTCGAC GCGCTGCTCA AGACAGGGCG CGCGGTGCGG
CCGCTGTTGC CCGCGAGCGT GCAGGCGAAG ATTCCGGCGC GCGCCGCTGT GCCTGCGAAG
CAACGCCCGG CGCCGCGTCA CACACGCCGC GTGCTGATGC TCGAAGGTTG CGTGCAGCCG
TCGCTCTCGC CGAATACGAA TGCCGCGGCG GCGCGCGTGC TGGATCGGCT CGGCATCAGC
GTGACGCGCG CGAGCGAAGC AGGCTGCTGC GGCGCGACCG ACTATCACCT GAACGCACAG
GACGCGGGGC TCGATCGTGC GCGCCGCAAT ATCGACGCAT GGTGGCCCGC GATTGCAGCG
GGCGCCGAAG CGATCGTCCA GACGGCGAGC GGATGCGGCG CGTTCGTGAA GGAATACGGA
CATCTGCTGC GCAATGATCC GCTCTACGCG GCCAAAGCGG CGCGCGTGAG CGCGCTGGCG
CGCGATCTCG TCGAAGTGCT GGCAGCCGAA CCGCTCGATG CGCTGCAGCC CGCCGACGAT
GCGATCGCAC TGCGCGTCGC GTTTCATTGC CCCTGCACGC TACAGCATGC TCAGAAGCTG
GGCGGCGCAG TCGAAAGCGT GCTGACGCGG CTCGGCTTCG ATCTGCCCGC CGTACCCGAT
GCGCATCTGT GCTGCGGTTC GGCAGGCACG TACTCGATTA CGCAGCCCGA GCTTGCGCAG
AAGCTGCGCG ACAACAAGCT GACGGCGCTC GAAAGCGGAC AGCCGGACAT CATCGCGACC
GCGAACATCG GTTGTCAAAT GCATCTGGAT GGCGCAGGCA GAACGCGCGT GCGTCACTGG
ATCGAACTGG TCGAGGAAGC ACTGGATGCG TCGATGCGGC CGCTGTCATC CGCAGCGGCG
GCAGAGCCAT GA
|
|---|
| Protein sequence | MQTNLDSHAK ALPDAEEAES ILRSCVHCGF CNATCPTYQL LGNELDGPRG RIYLIKQLLE
GEPVSARTQL HLDRCLTCRN CETTCPSGVT YHRLLDIGRA ELERRIERPI GERLTRKGLR
TVIPRPDVFD ALLKTGRAVR PLLPASVQAK IPARAAVPAK QRPAPRHTRR VLMLEGCVQP
SLSPNTNAAA ARVLDRLGIS VTRASEAGCC GATDYHLNAQ DAGLDRARRN IDAWWPAIAA
GAEAIVQTAS GCGAFVKEYG HLLRNDPLYA AKAARVSALA RDLVEVLAAE PLDALQPADD
AIALRVAFHC PCTLQHAQKL GGAVESVLTR LGFDLPAVPD AHLCCGSAGT YSITQPELAQ
KLRDNKLTAL ESGQPDIIAT ANIGCQMHLD GAGRTRVRHW IELVEEALDA SMRPLSSAAA
AEP
|
|---|
| |