| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5633 |
|---|
| Symbol | |
|---|
| ID | 6247139 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010625 |
|---|
| Strand | - |
|---|
| Start bp | 110249 |
|---|
| End bp | 111148 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642597351 |
|---|
| Product | tartrate dehydratase subunit alpha |
|---|
| Protein accession | YP_001861753 |
|---|
| Protein GI | 186470435 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
|---|
| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.648289 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.17022 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGACAAGG AAGCCAGTAT CCAGTCCCTT ACCGATACGA TGGCCAAATT CACGGCCTAT
ATCGGCAAAC GCCTGCCAAA GGACGTCAAA GCGAAATTAT CCGAGTTGCG GACGATGGAA
ACGAATCCGC TGGCCAAGTC GATCTACGAC TCGATGCACG GCAATCAGGA AGCTGCCGAC
AAACTGAATC GTCCAAGCTG CCAGGACACG GGTGTCATTC AGTATTTCGT CGAAGCAGGC
GCACATTTTC CGCTGCTTGG GGAACTCGAA GACATTCTGC GCGGCGCTAC CGAGGTCGCG
ACGAGGCTCG GACCTCTGCG TCACAACGCC GTCGAAACGT TCGATGAAAA GAACACCGGG
ACCAACACGG GCACGCAGAT TCCCTGGCTG GACTGGCGCA TCGTCCCCGA CAAGGACAGC
TGCACCATCG ATGTTTACAT GGCCGGCGGC GGATGCACGC TGCCCGGCGC AGCAAAGGTT
CTGATGCCCG GCCAGGGCTA TGAGGGCGTG GCCGAGTTCG TGATGGATGT CATCACCGAG
CGCGGGGTGA ATGCATGTCC GCCTCTGCTC GTCGGCGTGG GCGTGTCCAC TTCTGTCGAA
ACGGCCGCCC GGCTTTCCAA GCTCGCTATC CTGCGGCCGG TCGATTCGAA GAGCGCAAAC
CCGCGCGCAG CCTTGATGGA GGAATTGCTC GAACAAGGGC TCAATGAAGT CGGCATTGGC
CCTCAGGGCC TCACCGGAAA CAACAGCGTG ATGGGCGTCA ATATCGAATC GTCAGCACGT
CATCCGTCGA CGATCGGTGT TGCGATCAAC ACTGGTTGTT GGGCTCATCG GCGCGGAAAG
ATCAAGATCA ACGCCGACCT GTCGTACGAA ATACTTTCCC ATGAAGGAGT GGTGCTGTGA
|
|---|
| Protein sequence | MDKEASIQSL TDTMAKFTAY IGKRLPKDVK AKLSELRTME TNPLAKSIYD SMHGNQEAAD
KLNRPSCQDT GVIQYFVEAG AHFPLLGELE DILRGATEVA TRLGPLRHNA VETFDEKNTG
TNTGTQIPWL DWRIVPDKDS CTIDVYMAGG GCTLPGAAKV LMPGQGYEGV AEFVMDVITE
RGVNACPPLL VGVGVSTSVE TAARLSKLAI LRPVDSKSAN PRAALMEELL EQGLNEVGIG
PQGLTGNNSV MGVNIESSAR HPSTIGVAIN TGCWAHRRGK IKINADLSYE ILSHEGVVL
|
|---|
| |