Gene Bphy_5443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5443 
Symbol 
ID6246927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp2588279 
End bp2589214 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content68% 
IMG OID642597163 
ProductLysR family transcriptional regulator 
Protein accessionYP_001861566 
Protein GI186474224 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.261718 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0544957 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTCA CACGTATCAC CATACGCCAG TTCGAGGCGT TTCTCGCGAT CGTCGATCAG 
AACGGCATTG CCGCGGCAGC GCAGCGGCTG GGTCTGACTT CGTCCGCCGT GAGTCAGCTG
CTGGCCGAAC TGGAGCGCGA ACTGGGCTTT CGCCTGTTCG ACCGCACGAC GCGTCGCGTC
AGTCTTTCCA CGGCAGGCCG CGATTTTCTC CCGTCCGCGG AATCCGTGCT GCGCCACCTG
CACGCGGCCG AGCAGACGGC CAGCGACATC CGCAATCGCG CCGCGGGCAT CGTGCGCGTT
GGCGCGCCGC TCGTGCTCGC GAGCACGGCG ATCCCGTATG CGATTGCGGG CTATGTGCAA
GAAAAGCCGA AGGTCGTGGT GCGCGTCGTC GACACGGATG TCGAGCGGCT GGTCGAGCGC
GTGGCGAGCG CAGACGTCGA TCTGGCCGTC GGGCCCGACC GCGCCACGGG CGACCGCGTG
CAGCGCACGG CGATCTTCAG AAGCCCGTGG GTGCTGTGGT GCGCGGCACA TCATCCGCTC
GCGCGCCGGC GGCGCTTGCG CTGGCAGGAC CTGCGCGGCA CGTCCATCAT CGCGACGGGC
CGGGATCACG AGGCGAGCGT CGCGCAGATG CTGGCCGACC AACCTTCGGA TGCGCGCATT
GCGCCCGTCG AGGTCGTCGA TAACGTGACA ACGGCCTTCG GGCTCGCTGC GCAAGGTCTT
GCCGTTACGC TGGCGCCCGC GTATGTGAAG CCGCTCGCGC AGACGTTCGG GCTCGCGATG
CGGCGCGTGG TCGAGCCGGA GACGATCCGC GAGGTCTGCA TCTATCGTCC CGTCGACCGT
TCGCTGTCGC CGCCCGCCGA TGGGTTCGCG GAATATCTCG GCGTGAGTCT GAAAACATGG
GATCGAGAGA CCCAAGGCGC GGCGAGCGGA AAATGA
 
Protein sequence
MALTRITIRQ FEAFLAIVDQ NGIAAAAQRL GLTSSAVSQL LAELERELGF RLFDRTTRRV 
SLSTAGRDFL PSAESVLRHL HAAEQTASDI RNRAAGIVRV GAPLVLASTA IPYAIAGYVQ
EKPKVVVRVV DTDVERLVER VASADVDLAV GPDRATGDRV QRTAIFRSPW VLWCAAHHPL
ARRRRLRWQD LRGTSIIATG RDHEASVAQM LADQPSDARI APVEVVDNVT TAFGLAAQGL
AVTLAPAYVK PLAQTFGLAM RRVVEPETIR EVCIYRPVDR SLSPPADGFA EYLGVSLKTW
DRETQGAASG K