Gene Bphy_5416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5416 
Symbol 
ID6246900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp2560367 
End bp2561533 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content71% 
IMG OID642597136 
Productputative acyl-CoA dehydrogenase-related protein 
Protein accessionYP_001861539 
Protein GI186474197 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.699876 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATA TCGGCCACGA TCCCCTGCGA CGCGCCGCGC CGGCCGCGTG GTACATCAAC 
AGCGGACTGC GCCTGAGCGA TGAGGAGCCG GACGCCGACA TCGAACCGAA GCGCTATGCG
CTCGTCCCGG CGCTGGAGCG ATACCTGGCC GGCGTGCGCT ATGGCGACGA GGCATCGGCG
AGCCGCGCGG CGACGCTCGA TGCGCTGCGC GCGCGAGGCA TGGACTGGCT GCCGCTGCCG
GGCCGCGGCG AAACGGCGAC ACGCTGGCGC GGTCTCGCAG CCGTGGCAGC GTGCGATCTG
CCGCTGGCCA AGCTCTATGA GGCGCACACC GATGCGCTTG CCATCCTCGC GGAACTGAAC
CGCGCCGACC TCGCTGACGA TGGCAGCGGC AGTTGGGCCG TATGGGCCGC CGAGCCGCCG
AACCCGAAGC TGATCGCGCG TGCATCGGAC GGCGGCGATG GCTTGACGCT CGAAGGCGTC
AAGCCGTGGT GTTCGGGCGC GCCGCACGCG ACACATGCGT TGGTGACGGC ATGGCGCAAC
GACGAGCCAG TGTTGGCTGC CGTCGAACTG TCGCAGCCTT CCATCGCGAT CGACACGAGC
GGCTGGCAGG CGGTCGGCAT GCGTGCGACG GGCACGAGCT GCGTGCGCTT CGACGGCGCG
CGTGCGGCGC AGGTTGGCGG GGCGGGCGCG TATCTGTCAC GTCCTGGCTT CTGGCATGGC
GGCGCGGGTA TCGCCGCGTG CTGGTACGGC TGCGCGGCGG CGCTCGCGTC GATTCTGCGC
GACAGCGTCA AGCGCCACGC GGACCCGCAC GCGTGCGCGC ATCTCGGCGC CGCTGATGCC
GAACTGTCCG CCGTGGCTGC GTTGCTGCGC GAGTCGGCCG CATGGATCGA CGCGCATCCG
CGCGACGACG CGCAGCAGTG CGCGCTGCGC GTGCGCGTCG CCGTCGAACA GGCCGCGGCG
CAGGTGATGG AGCATGTTTC GCGCGCGCTC GGCGCCATGC CGTTCTGCAC GGATGCGTGG
TTCGCGCACG CGATAGCGGA TCTGCCCGTG TTTCTGCGGC AGAGCCACGC CGAACGCGAC
GAGTGTGCAT TAGGACAGAC GCTGCTCGAC GGCGATGGCG ACGAAGATGG CGACGCATGC
GGGCGCTGGG ATCTGGCGTC GCATTGA
 
Protein sequence
MSDIGHDPLR RAAPAAWYIN SGLRLSDEEP DADIEPKRYA LVPALERYLA GVRYGDEASA 
SRAATLDALR ARGMDWLPLP GRGETATRWR GLAAVAACDL PLAKLYEAHT DALAILAELN
RADLADDGSG SWAVWAAEPP NPKLIARASD GGDGLTLEGV KPWCSGAPHA THALVTAWRN
DEPVLAAVEL SQPSIAIDTS GWQAVGMRAT GTSCVRFDGA RAAQVGGAGA YLSRPGFWHG
GAGIAACWYG CAAALASILR DSVKRHADPH ACAHLGAADA ELSAVAALLR ESAAWIDAHP
RDDAQQCALR VRVAVEQAAA QVMEHVSRAL GAMPFCTDAW FAHAIADLPV FLRQSHAERD
ECALGQTLLD GDGDEDGDAC GRWDLASH