Gene Bphy_5103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5103 
Symbol 
ID6246597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp2205462 
End bp2206253 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content61% 
IMG OID642596833 
ProductABC transporter related 
Protein accessionYP_001861236 
Protein GI186473894 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4598] ABC-type histidine transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0351754 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.00435493 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACGCTA CGGCACCCGT TGCACTGTCG GTCAAGAACA TTCACAAGTC GTTCGGCGAC 
CATCACGTCC TGAAGGGTAT TTCGCTTGAC GCGCATGAAG GCGACGTCAT TTCGATTCTC
GGCGCGAGCG GGTCGGGCAA GAGCACGTTC CTGCGCTGTC TGAACCTGCT CGAAACGCCG
GATGACGGCA GCGTCGCGCT CGCGGGCGAG ACATTGAAGA TGAAGCGCCG CAAGGACGGC
AAGTTTCAGC CGGACGATCG CAAGCAGGTC GATCGCATCC GTTCGCAACT CGGCATGGTG
TTTCAGAACT TCAATCTGTG GTCGCACATG ACGGTGCTCG AGAACCTGAT CGAAGGGCCG
ATGCGCGTGC AGAAGCGCAG CCGCGCGGAA GCCGTCGAAG AGGCGGAAGC GCTGCTCGCG
AAAGTCGGTC TTGCTGAAAA GCGCGGACAT TATCCTGCGC ATCTGTCGGG CGGTCAGCAG
CAGCGCGTCG CGATTGCCCG CGCGCTGGCG ATGCATCCAA AAGTGATGTT GTTCGACGAG
CCGACTTCGG CGCTCGACCC CGAACTCGTC GGCGAAGTGC TGCGAGTCAT GCGCTCGCTC
GCCGAAGAAG GCCGCACGAT GCTCGTCGTC ACGCACGAAA TGGGCTTTGC GCGCCACGTG
TCGAATCGTG TGATGTTCCT GCATCAGGGG CAGACGGAAT GCGACGGCAC GCCGGACGAA
GTATTCGGTG AACTCAAATC CGAGCGCTTC AAGCAGTTCG TCTCGAGCCA TCATTCGCGC
ACGACGAACT GA
 
Protein sequence
MNATAPVALS VKNIHKSFGD HHVLKGISLD AHEGDVISIL GASGSGKSTF LRCLNLLETP 
DDGSVALAGE TLKMKRRKDG KFQPDDRKQV DRIRSQLGMV FQNFNLWSHM TVLENLIEGP
MRVQKRSRAE AVEEAEALLA KVGLAEKRGH YPAHLSGGQQ QRVAIARALA MHPKVMLFDE
PTSALDPELV GEVLRVMRSL AEEGRTMLVV THEMGFARHV SNRVMFLHQG QTECDGTPDE
VFGELKSERF KQFVSSHHSR TTN