| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4585 |
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| Symbol | |
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| ID | 6246103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | + |
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| Start bp | 1646406 |
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| End bp | 1648121 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642596335 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001860742 |
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| Protein GI | 186473400 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.711383 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCTTA AGATTCCGAT CCTTCTGCTG TTGCTCATGA TGCTGGCGTC GCCATTTCGG
GCTGCGCGCG CAGAGGTGCG CCCCGAATCG CCCGTCCTCC TCGAGTCGGT TCTCGAAACA
GCGCCCGTCG AGATCGACGG TCAGCTCCTT TTCATGGTTC GAGGAGTGAC GTCCTTTCCC
GCTGAGCAGC GGGCCGAGGC CATCAGGGGA AGAATCGAAA AGGTGGCGGC GGACCGCGTA
TTTCCAAGCG ACGGCTTAAG CGCCGAACCA GTGGGAAATG TCACGATGAT CATGGCGAGA
CAAGTCACGC TGATGATCGT GAGCGAGGCC GATGCGCAGT TAGAGCACAC GAGCCGCGAC
CATCTCGCAA CACTGCACAT GATGCGGATC CGGCAGGCCA TCGACGAATA CCGCCAGTCG
CGTACGAGCG ACGCCCTGCT TTCGGCCGGG CTCTTCAGCA CCGCGGCTAC GGCCGTGCTA
GCGCTGGTTA TCGCTGCCCT GCTCGCGCTC AACCGGTGGT TGGATAGAGC TCTTTCCCGA
CGTCTGCAGA GTCGTGTCCA CGCGGTAGGC ATCCAGTCCT TTCAGATCCT CGGTTCCGAA
ACTATCTGGA AGGCGCTTCA TGGTCTGGTG CTTCTACTTG GCGTCGCGAC AATTGCTGTG
TCAGCGTATG CATACCTGCA TTACGTACTT GCACTCTTTC CATGGACCCG CTCCGTCTCC
AACGACCTGT TCGATCTTGC CGTCAACGCC GCCGAACGTA TCGGAAAGTC AGTCGGCGCA
AGAATCCCGG ACATTCTGGT ACTCGCCAGC ATCTACTATC TGTGCCGGTT CGTTCTTCGG
TTGACCCGGC ACTTTTTCGA CGCGGTGGCA CAGAAGCGCG TCAGGTTCGC CCAGTTCGAG
CCGGAATGGG CTCTGCCCAC GTACCGTCTC ATCCGGGTCC TCATCCTTGC CTTCGCGCTC
ATCATCGCTT ACCCCTATAT TCCTGGCTCG GAATCTGCCG CTTTCAAGGG AGTCTCGATC
TTCATCGGCC TGGTGTTCTC TCTCGGTTCG TCTGCCGCCA TTTCCAATTT GATCGCCGGC
TACCTGATGA CTTATCGAAG GGTCTTCAAA GTCGGCGACC GCGTAAAGGT GGGCGACGTA
ACGGGGGACG TGATCGCGAT CCGCCTGCAA GTGACCCATC TGCGGACGAT CAAGAACGAG
GAGGTAACGA TCCCCAATTC GCAGATACTG AACGGCGACG TAACAAACTT CAGCTCGCTG
GCTGTGACAC CAGGACTGAT TCTGCATACC ACGGTCGGAA TTGGATATGA GACGCCCTGG
CGGCAGGTGG AGGCGATGCT TCGCATGGCC GCAAAGCGAA CCACGGGCAT CGCGGGAGAT
CCGCAGCCGT TCATCCTGCT GATCGCGTTA GGCGACTTTG CCGTCACCTA TGAACTGAAC
GGGTACATCC ATGACCCGCA CGCAATTGCC CAAATCCATG CGGAACTGCA TCGACATATC
CTTGATGTCT TCAACGAGTA CGGAGTGCAG ATCATGACGC CCGCCTACGA GCGCGATCCG
CCCGAACCGA AGGTCGTGCG ACAGGAGCAG TGGTATGCGG CGCCGGCGTC ATCTGTTCAA
CGGGCGGAAG AACGGGCGGA AGCAGCGAAC GCAGAGGAGG GCGCATCGCC GACGACTCTG
GCCGTCCAGC GCTCCACGGT CTACCGAACG GAGTGA
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| Protein sequence | MSLKIPILLL LLMMLASPFR AARAEVRPES PVLLESVLET APVEIDGQLL FMVRGVTSFP
AEQRAEAIRG RIEKVAADRV FPSDGLSAEP VGNVTMIMAR QVTLMIVSEA DAQLEHTSRD
HLATLHMMRI RQAIDEYRQS RTSDALLSAG LFSTAATAVL ALVIAALLAL NRWLDRALSR
RLQSRVHAVG IQSFQILGSE TIWKALHGLV LLLGVATIAV SAYAYLHYVL ALFPWTRSVS
NDLFDLAVNA AERIGKSVGA RIPDILVLAS IYYLCRFVLR LTRHFFDAVA QKRVRFAQFE
PEWALPTYRL IRVLILAFAL IIAYPYIPGS ESAAFKGVSI FIGLVFSLGS SAAISNLIAG
YLMTYRRVFK VGDRVKVGDV TGDVIAIRLQ VTHLRTIKNE EVTIPNSQIL NGDVTNFSSL
AVTPGLILHT TVGIGYETPW RQVEAMLRMA AKRTTGIAGD PQPFILLIAL GDFAVTYELN
GYIHDPHAIA QIHAELHRHI LDVFNEYGVQ IMTPAYERDP PEPKVVRQEQ WYAAPASSVQ
RAEERAEAAN AEEGASPTTL AVQRSTVYRT E
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