Gene Bphy_4491 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_4491 
Symbol 
ID6246011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp1536745 
End bp1537635 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content63% 
IMG OID642596243 
Producttransglutaminase domain-containing protein 
Protein accessionYP_001860650 
Protein GI186473308 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1305] Transglutaminase-like enzymes, putative cysteine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.401966 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.176228 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGACG CGCAGACGCT CTTGTGCGTG TCGCATCGCA CGACGTATCA CTATTCGACG 
CTTGTCGAAA CCGCGCAGCA TCTTGCGACC ATTCGGCCGC TCGCGTGTGC CTGGCAGCAC
GTAGTCGCGC ACACCGAGCG CATCGAGCCG GCGCCATCGT ATCTGAATAG CCGCATCGAT
GCATTCGGCA ACGACGTGCT GTACTTCGCG CTCGACGCGC CGCACGAGCG TCTGCAAATG
GTCAGCGAAA CAACCGTGCA GCTCACGCCG CGCTGGTCCG ATCTCGATCC CGAGGCGACG
TCCGCATGGG AAGAGGTCGC GGATTCACTG CGGTTTCGTG CGGGCGGTGC GTGTCATCCG
CAGGCGGAGT TCTGTTTCGC ATCGCCGAAC ATCGCGCTCA AGCCTGCATT GCGCGACTAC
GCGCTGCGCA GTTTCCGGCC GGGCATCCCC ATCGTTGCGG GCGCGATCGA TCTGATGCAC
CGCATTCATG CGGATTTCGA CTACAAACCG TCCGCGACCA TGTTCGATAC GCCCGCCGAA
CGCGCATTCG ATATGAAGAG CGGTGTGTGT CAGGATTTCG CGCAGGTGAT GATCGGCTGT
CTGCGCGCGC TTGGCTTACC GGCGCGTTAC GTCAGCGGCT ATCTGCGCAA CGACCCGCCA
CCCGGCCAGC CACGTCTGAT CGGCGCGGAT GCGTCGCATG CGTGGGTATC GGTGCATTGC
CCGCAAAGCG GCTGGATCGA TCTGGACCCG ACCAACGACG TGCTCGCGGA TATGGATCAC
GTGACCCTCG CAATCGGCCG CGACTATAGC GACGTCTCGC TGCTGCGCGG CATGATCCTT
GGCGGCGGCG CACATCGCGT CGATGTGGCC GTCGGTGTGG TGGCGCTGTG A
 
Protein sequence
MKDAQTLLCV SHRTTYHYST LVETAQHLAT IRPLACAWQH VVAHTERIEP APSYLNSRID 
AFGNDVLYFA LDAPHERLQM VSETTVQLTP RWSDLDPEAT SAWEEVADSL RFRAGGACHP
QAEFCFASPN IALKPALRDY ALRSFRPGIP IVAGAIDLMH RIHADFDYKP SATMFDTPAE
RAFDMKSGVC QDFAQVMIGC LRALGLPARY VSGYLRNDPP PGQPRLIGAD ASHAWVSVHC
PQSGWIDLDP TNDVLADMDH VTLAIGRDYS DVSLLRGMIL GGGAHRVDVA VGVVAL