| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4459 |
|---|
| Symbol | |
|---|
| ID | 6245980 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | + |
|---|
| Start bp | 1499581 |
|---|
| End bp | 1501011 |
|---|
| Gene Length | 1431 bp |
|---|
| Protein Length | 476 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642596212 |
|---|
| Product | 3-carboxy-cis,cis-muconate cycloisomerase |
|---|
| Protein accession | YP_001860619 |
|---|
| Protein GI | 186473277 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0015] Adenylosuccinate lyase |
|---|
| TIGRFAM ID | [TIGR02426] 3-carboxy-cis,cis-muconate cycloisomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.484308 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCCGA ACGCCGCGCG CTCTCTGCGC GAACCCAACG CGCATTCATC CAACGCACTG
AACATCATGC TAGAAGCTAG CGCCCGCTTG ACTGGCCTGA TCTGCGGCAC GCAGCCGATG
AACGACATCT GGTCGCCGCG TGCGACGCTG CAACGGATGC TCGACGTCGA AGCGGCTCTG
GCCAGGGCCT CGGCGGCACA TGGCGTGATC CCGCAGTCGG CCGTCGCCGC AATCGAAGCG
ACCTGCAACG CGGACAAGCT CGACGCCGAC GCACTGGCAC GCGACGCCGC GCTCGGCGGC
AATCTCGCGA TTCCCCTCGT CAAACAGCTG ACCGCGCGCG TCAAGGACGC CGATGCGCAA
GCGTCGAAAT TCGTCCATTG GGGCGCGACG AGTCAGGACA TCATCGATAC GGCGACCGTG
CTGCAACTGC GCGACACGCT CGATCTGCTC GACCGCGCAA TGGCGTCGAC GTGCGACGCC
ATTGCCGCGC TTGCGCAACG GCACCGCGCG ACGCCGATGA TCGGCCGCAC GTGGCTGCAA
CAGGCGCTGC CCATCACGCT CGGCCTGAAG TTTGCCCAAT GGCTCGATGC GTTGCTGCGT
CATCGCGAGC GGCTCGACGC ATTGCGCGAG CGCGCGCTCG TGCTGCAATT CGGCGGCGCG
GCTGGCACGC TCGCGAGTCT GCGCGACAAG GGCGGCGCGG TGGCCGAAGC GCTCGCGCAG
GAACTGAAGC TGCAGTTGCC CGCCGTGCCG TGGCACACGC AGCGTGATCG CATCGCCGAA
GCGGCTTCGT TTTTCGGCAT GCTGATCGGC ACGCTGGGGA AAATCGCGCG CGATATCTCG
CTGCAAATGC AGACGGAACT CGGCGAACTC GGCGAGCCGA CTGCGGCAGG CAAGGGCGGT
TCCTCGACCA TGCCGCACAA GCGCAACCCG GTGGGCTGCG CGGCCGTGCT GACAGCGGCG
ACGCGCGCAC CCGGCCTCGT CGCGACGGTG TTCGCGGGGA TGGTGCAGGA GCACGAACGC
GCACTCGGCG GATGGCAGGC CGAATGGGAT TCGTTGCCGG ATCTCGCGCG TCTCGCGGGC
GGTGCGCTCG CGAATATCGA GCAGATCGCG AAGGGTCTCG AAGTGAACGT GGAACGGCTG
GCTGCGAATC TCGACGTCAC GCACGGCCTG ATTCTCGGCG AAGCGGTGAT GCTTGCGCTC
GGCGACAAGA TCGGGCGGAT GGACGCGCAT CATCTCGTCG AGCATGCATC GAAAGAGGCC
GTGAAAAGCG GCGAGACACT ATTCGACGTG CTGGCCGCCG ATGCATCCGT CACTCAACAT
CTGCCCGTCG AGCAACTGAA ACGTCTGCTT GATCCGGCCC ATTATGTCGG CAGCGCGCAC
GCTTTCGTGG ACGCCGTGCT GGCTCTTCAT ACCGCGCGCA AGAACGCGTG A
|
|---|
| Protein sequence | MEPNAARSLR EPNAHSSNAL NIMLEASARL TGLICGTQPM NDIWSPRATL QRMLDVEAAL
ARASAAHGVI PQSAVAAIEA TCNADKLDAD ALARDAALGG NLAIPLVKQL TARVKDADAQ
ASKFVHWGAT SQDIIDTATV LQLRDTLDLL DRAMASTCDA IAALAQRHRA TPMIGRTWLQ
QALPITLGLK FAQWLDALLR HRERLDALRE RALVLQFGGA AGTLASLRDK GGAVAEALAQ
ELKLQLPAVP WHTQRDRIAE AASFFGMLIG TLGKIARDIS LQMQTELGEL GEPTAAGKGG
SSTMPHKRNP VGCAAVLTAA TRAPGLVATV FAGMVQEHER ALGGWQAEWD SLPDLARLAG
GALANIEQIA KGLEVNVERL AANLDVTHGL ILGEAVMLAL GDKIGRMDAH HLVEHASKEA
VKSGETLFDV LAADASVTQH LPVEQLKRLL DPAHYVGSAH AFVDAVLALH TARKNA
|
|---|
| |