Gene Bphy_4427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_4427 
Symbol 
ID6245948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp1466695 
End bp1467483 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content63% 
IMG OID642596180 
Producthydroxypyruvate isomerase 
Protein accessionYP_001860587 
Protein GI186473245 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3622] Hydroxypyruvate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.198005 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCGCT TCGCCGCCAA TCTGAGCATG ATGTACAACG AACACGCGTT CCTCGATCGT 
TTCGCCGCCG CTGCGCGCGA CGGCTTCCAG GCCGTGGAAT TCTTGTTCCC TTATGACTTT
CCTGCCGCAG ACCTGAAGTC GCGTCTGACG GAACACGGTC TCACGCAGGC GCTCTTCAAT
GCGCCGCCGG GCGACTGGGG GGCGGGCGAG CGCGGCATCG CGTCGTTGCC GGGCCGTGAA
GACGAGTTTC GCCGCGGTGT CGACACGGCG CTCGAGTATG CGCGCGTGCT CGGCAACGAC
AAGCTGCATG TGATGGCGGG ACTGATCAAG CCCGAGCAAT CGCGCGCCGC ACATCGCGAC
GTCTATCTGA AGAACCTCGC GTATGCCGCG CAAACCGCAC GCGCAGAAGG GATCACCGTC
GTCATCGAGC CGATCAATAC GCGCGACATT CCCGGCTTCT TTCTGAACCG GCAAGACGAC
GCGCAGGCGA TCTGTGCGGA AGTCGGCGCC GCGAATCTGA AGGTGCAGTT CGACCTGTAC
CACTGCCAGA TCGTCGAAGG CGATCTCGCG GTGAAGCTCA AGCGCGACAT GAAGGGTATC
GGCCATATCC AGATCGCGGG CGTGCCCGAG CGGCACGAAC CCGATATCGG CGAAGTGAAC
TATCCGTATC TGTTCGCGCT GATCGACGAG CTTGGCTACG ACGGCTGGCT CGGTTGCGAA
TACCGCCCGC GTGCGGGCAC GTCCGAAGGT CTCGGATGGA TCCGGCCGTA CGTGAACGTG
CGCGGCTAG
 
Protein sequence
MPRFAANLSM MYNEHAFLDR FAAAARDGFQ AVEFLFPYDF PAADLKSRLT EHGLTQALFN 
APPGDWGAGE RGIASLPGRE DEFRRGVDTA LEYARVLGND KLHVMAGLIK PEQSRAAHRD
VYLKNLAYAA QTARAEGITV VIEPINTRDI PGFFLNRQDD AQAICAEVGA ANLKVQFDLY
HCQIVEGDLA VKLKRDMKGI GHIQIAGVPE RHEPDIGEVN YPYLFALIDE LGYDGWLGCE
YRPRAGTSEG LGWIRPYVNV RG