Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_4420 |
Symbol | |
ID | 6245941 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010623 |
Strand | + |
Start bp | 1458922 |
End bp | 1460268 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642596173 |
Product | NADH dehydrogenase |
Protein accession | YP_001860580 |
Protein GI | 186473238 |
COG category | [C] Energy production and conversion |
COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0675814 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCATCGTT TTGTCGTCGT AGGTGGAGGC GCGGGGGGCC TGGAACTGGC CACGCGGCTC GGCGATCGTT ACGCACGCAG GAAGCGCGAC GGCGCGCCGC TAGCGCAGGT GACGCTGGTC GATCGTTATC CGACTCATAT CTGGAAGCCG CTGCTGCACG AAGTTGCGGC GGGCAGCATG GACCCTTTCA CGCAGGAACT CGAGTACGCG GCGCAGGCGC GCTGGCATGG TTTCGAGTTC CAGCAGGGCG AATTGATCGG CATCGACCGC ACGGTGAAGA CGATCACGCT CGGCCGTGTG CTCGACGACG ACGGCGCGGA ACTGCTGCCC GAGCGCGTTC TCGAATACGA CACGCTCGTC ATCGCGATCG GCAGTACGAC GCATTTCTTC GGCGTCAAAG GCGCGCCGGA ATATTCGCTG GCGCTCGATA CCGTCCAACA GGCCGAGCGC TTTCGCAAAC GTCTGATCGC TGCCTGCATG CGCGCCGAGC ATCAGGAGCA CGAGCCCGTC GAATCGAATC CTGGCGCGTC GTCGACGGAG CCGCGCATCC AGGTCGCGAT TGTGGGCGGC GGCGCGACGG GCGTCGAACT CTCGGCCGAA TTGCGCAATA CCGCGCAAGT ACTGTCCGCT TATGGGCTGC ACAAGCTCGA TCCGCGCCAT GACGTGGGCA TCGTGCTGAT CGAAGCGGGG CCACGCATTC TGCCGGCGCT TCAGGAGCGG GTGTCGACGG CGACAGCGGA ACTGCTGCAG AAGCTCGGCG TCAAGCTGAT GGTCGGCGAG ACGGTCGCGG AGGTCGCGCC GGGCGTGGTC CGCACGGCGA GCGGCAAGAC CGTGCGTGCC GATCTGACCG TGTGGGCGGC GGGCATCAAG GCGCCGCCCG TGCTCGGCCA GCTCGACGGG CTGCCTGTGA ACCGGTTAGG CCAGCTCGAA GTGCGCCGCA CGCTGCAAAC CGCCATCGAC GAAAACGTCT TCGCGCTCGG CGATTGCGCT GCTTGCCCGT GGCCCGGCAA CGAACGCAAC GTGCCGCCGC GCGCGCAGGC CGCGCACCAG CAGGCGAGTT TCCTGCTGCG CGCGCTCGGC AACCGTCTCG AAGGCCGGCC GCTGCCGGAG TTCACCTATC GCGACTTCGG ATCGCTCGTG TCGCTGGGGC ACTTCAGCGC CGTCGGCAAT CTGATGGGCG GCGTGATTGG CGGCAACATG CTGATCGAAG GGCTGTTTGC GCGCTTCATG TACATGTCGC TGTACCGGCT GCATATCGCA GCGCTGCACG GCTATGCGCG GATGGTGCTC GATACGTTCG CTCACTGGCT GCGGCGCACG ACGCTGCCGC GCGTCAAATT GCACTGA
|
Protein sequence | MHRFVVVGGG AGGLELATRL GDRYARRKRD GAPLAQVTLV DRYPTHIWKP LLHEVAAGSM DPFTQELEYA AQARWHGFEF QQGELIGIDR TVKTITLGRV LDDDGAELLP ERVLEYDTLV IAIGSTTHFF GVKGAPEYSL ALDTVQQAER FRKRLIAACM RAEHQEHEPV ESNPGASSTE PRIQVAIVGG GATGVELSAE LRNTAQVLSA YGLHKLDPRH DVGIVLIEAG PRILPALQER VSTATAELLQ KLGVKLMVGE TVAEVAPGVV RTASGKTVRA DLTVWAAGIK APPVLGQLDG LPVNRLGQLE VRRTLQTAID ENVFALGDCA ACPWPGNERN VPPRAQAAHQ QASFLLRALG NRLEGRPLPE FTYRDFGSLV SLGHFSAVGN LMGGVIGGNM LIEGLFARFM YMSLYRLHIA ALHGYARMVL DTFAHWLRRT TLPRVKLH
|
| |