| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4393 |
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| Symbol | |
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| ID | 6245915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 1431219 |
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| End bp | 1434653 |
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| Gene Length | 3435 bp |
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| Protein Length | 1144 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642596147 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_001860554 |
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| Protein GI | 186473212 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.573517 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.10506 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGCTC CCCACGCCTA CGCGCCGCGG ATTTACTTCG TTCATTCTCC CCTCGTCGGA
CGGCTGGAAG CGTGGCCCGC GCAATTCGCG CACGCGGCTT CGCTCGGCTT CGATCATGTG
CTGATCGGCG GGCTGTTCCA GCCGGGACAG GCGGGCCACG CGCAAATCGT CAGCGATCAT
GCGCGGCTGC ATCCCGCGCT CGCCACCGAC CAGCCCGCGC ACGAAGGGCT GCAGCGTCTC
GCCGAAACAG CGAGTCAGCA TGGTCTCACC TTGCTGGTCG ATCTCGTGAT CGACCGCGCG
GCCGCCGACG GTCAGCTCTA TCGCGAGCAT CGCGACTGGT TTCATCCGTT CGAGCCGGAA
GAGGCGCGGC TCGATCCGCG TCATGCACGC CACGAAGACA ACGTCGCGTA TGCGAATTTC
AGCAACGAGC ATGTCGCCGG GCCGTTGATC GACTGGTGGG CGCATACGCT CGATGCGCTC
GCCGACGCGG GCATCGGTGG CTTCCGGTTC GATTCGCCGC ATCGTGTCCC TGTGTTTGCA
TGGCGGCGTC TGCTGGATGC CGTGCGCGCG TCGCGCCATC CGTCGACGCG CTTTCTCGCC
GCCACGCCCG GCCTGGTGCG TTCGGACATC GTCGCGCTCG AAAGCGTAGG CTTCGATGCC
GTGTTCTCGT CGTCGCGCTG GTGGGACTTC CGCGCGCCGT GGATGCTCGA GGAGCATGCC
GTGCTGACGC GCGCCGGCTC GCCCATTGCG TTTCCCGAAG CGCCGTACGG CACGCGCCTC
GCGGCGGACC TGGAGCAGGT GCACGACTCC GCTATCGTCG AGCGCGCGTA TCGCCGTGCG
TTGATGACGG CCGCGTCGAC GGGTACGGGC TGGCTGATGC CGATGGGCTT CGAATACGGC
ATTGCCGAGC CGATCTCGCA TACGCTCGGC GACGCCGGTC ATTACGCAAG CCTGCGCAGC
GCGGCGCGCT TCGATCTCAG CGAACGCGTT CGTCATGCAA ATGCGATTGC GCGCGACACG
TGGTCGTTGC AGACGAACGG CGAGCTGCGC TCGCTGTCCG GTCCCGACAC GCATGCCGCG
CTTCTACTAC GCGGCGACAA AAGGGACCTG CGCGATGCGG ACGAAGCGGT GCTGATCGCG
ATCAATCCCG AACTCGGCAC ACCCGTGCGC GTCGATCCCG CGCGCTTTCT CGACGGCGTG
CCGGGCGGTT TCACGCGCTT CGTGCCGCTC GGCACGGAAA CGCGCGGCGC GCCGCAGCCG
CTCACGCCCT TCACGCTGCC GCCGGGCGCG TGCCGCCTGT TCCGCGCGGT CGCCGAAAGA
CCCGTCGTGC TCGCGCCGCC CATCGACAAG CAGAGCGCCA CGACCTCGGG ACACAAGAGC
GTGCTCGATG CAATCGCGAC ATCGCGCGTC GCCATCGAAA GCGTGTCGCC TTCCGTCGAT
CACGGACGCT TTCCCGCCAA GCGGATCGTC GGCGAGCGCG TGCACGTGAC GGCAGCCGTG
TTCGCCGAAG GCCACGACAA GATCGCGGCC GCCGTGATCT GGCGCGCTGC CGACGAAACC
GCATGGCACG AAACGCCGAT GACGCCCGCG CAGCCCGCAG GCAACGACAT CTGGGAGGCG
CGCATCGCGC TCGAACGGCT CGGGCGTCAC GAGTACACGG TGATCGCGTG GCGCGACGAT
TTCGCGTCGT TGGTCGATCA CATGCAGAAG AAGCTGAAGG CTGATCAATC GGTCGATCTC
GAAGTCGAGG AAGCGAAGCA TCTGTTCGCG CTCGCGCTGG CCGAAGCGGA AACCGCCGAA
GGCTCGCGGC CGCAGCAGCT CGAAGCGATC GTCAAGGAGT TCATGAAAGC CGATATGGGC
GAGCGTCTTG CAATCGTGCT CGCGCCGACC ACGGCTGAGG CGTTTGCCGC CGCGCGCCAT
CGTCCGGGGT TGTCGCGCGA TCCGATCGTC TATCGCATCG ACGCCGAACG CGCGGGCGCG
CGCTTCGGCA GCTGGTACGA GATCTTCCCG CGCTCGATGA GCGACGACGA ACATCGGCAC
GGCAATTTCG ACGATGTGAT CCGCAAACTG CCGCGCATCC GCGACATGGG CTTCGACGTG
CTGTACTTCC CGCCGATCCA CCCCATCGGC ATCGCAAACC GCAAGGGCCG CAACAACACG
CTCACGCCGG GACCGGACGA CGTGGGCAGT CCGTATGCAA TCGGCGGCGC AGCGGGTGGA
CACGATGCCG TGCATCCGCA GCTCGGCACG CTCGACGACT TCAAGCGCAT GCTCGCCGCC
GCGCACGAAC ATGGCCTCGA GATCGCACTC GACTTCGCGA TTCAATGTTC GCCTGATCAC
CCGTGGCTGA AGCAGCATCC CACATGGTTC GCATGGCGTC CCGACGGCAC GCTGCGTTAC
GCGGAAAATC CGCCGAAGAA GTATCAGGAC ATCGTGAATC CGGACTTCTA TGCGCGCGAC
GCGAAGCCCG CGTTGTGGAT CGCGCTGCGC GACGTGATCC TGTTCTGGAT CGATGCAGGC
GTGCGCATTT TCCGCGTCGA TAATCCGCAT ACGAAGCCTT TTCCGTTCTG GGAATGGATG
ATCAACGATG TGCGCGCGCG GCATCCCGAC GTGATCTTTC TGTCGGAAGC GTTCACACGC
CCACGCGTGA TGGCGCGGCT CGCCAAGCTC GGCTTCTCGC AGTCGTACAC GTACTTCACG
TGGCGCGAAT CGAAGCGCGA CTTCACCGAG TATCTGACGG AACTCACACA GACCAGTCTG
CGCGACTTCT TCCGGCCTAA CTTCTTCGTG AACACGCCCG ATATCAACCC GCGCCATCTG
CAAAGACAGG GACGCCCAGG CTTTCTGATT CGCGCGGCGC TCGCGACGAT GCTGTCTGGA
CTGTGGGGCG TATATAGCGG TTTCGAACTG TGCGAAGCCG CCGCGTTGCC GAACAGCGAA
GAGTACCTGG ATTCGGAGAA GTACCAGATC CGCGCGTGGG ACTGGAACCG GCCCGGCAAC
ATCGTGCGCG AGATCACGGA ACTGAACCGT ATCCGCCGCA CGAATCCCGC GCTGCATACG
CATCTGAATC TCACGTTCCT GCCGGCGCAC AACGATCACA TCCTGTTCTT CGAAAAAGCC
ACGGAAGCGC GCGACAACGT GATCGTCGTC GCGATCAATC TCGATCCGCA CAACGAGCAG
GGCGCGGATA TCGAGTTGTC GTGGTCCACA TTCAACCGCT GGGGCGTGCA CGATCACAGC
ACCATCGACG TGATCGACCA GATGACGGGC GAGCGGTTTC AATGGCAGGG CCGATGGCAA
CACGTACGGC TCGATCCCGG CACTCGGCCG TTCGCGATCT GGCGCATTGC GCCCGCGGGC
GGCCTGCCGC GCGAGGCCGT TCCCGACGAT GCCGACGCGC ATCGGGCCGC CCATGACACG
ACATTCAATG AATGA
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| Protein sequence | MEAPHAYAPR IYFVHSPLVG RLEAWPAQFA HAASLGFDHV LIGGLFQPGQ AGHAQIVSDH
ARLHPALATD QPAHEGLQRL AETASQHGLT LLVDLVIDRA AADGQLYREH RDWFHPFEPE
EARLDPRHAR HEDNVAYANF SNEHVAGPLI DWWAHTLDAL ADAGIGGFRF DSPHRVPVFA
WRRLLDAVRA SRHPSTRFLA ATPGLVRSDI VALESVGFDA VFSSSRWWDF RAPWMLEEHA
VLTRAGSPIA FPEAPYGTRL AADLEQVHDS AIVERAYRRA LMTAASTGTG WLMPMGFEYG
IAEPISHTLG DAGHYASLRS AARFDLSERV RHANAIARDT WSLQTNGELR SLSGPDTHAA
LLLRGDKRDL RDADEAVLIA INPELGTPVR VDPARFLDGV PGGFTRFVPL GTETRGAPQP
LTPFTLPPGA CRLFRAVAER PVVLAPPIDK QSATTSGHKS VLDAIATSRV AIESVSPSVD
HGRFPAKRIV GERVHVTAAV FAEGHDKIAA AVIWRAADET AWHETPMTPA QPAGNDIWEA
RIALERLGRH EYTVIAWRDD FASLVDHMQK KLKADQSVDL EVEEAKHLFA LALAEAETAE
GSRPQQLEAI VKEFMKADMG ERLAIVLAPT TAEAFAAARH RPGLSRDPIV YRIDAERAGA
RFGSWYEIFP RSMSDDEHRH GNFDDVIRKL PRIRDMGFDV LYFPPIHPIG IANRKGRNNT
LTPGPDDVGS PYAIGGAAGG HDAVHPQLGT LDDFKRMLAA AHEHGLEIAL DFAIQCSPDH
PWLKQHPTWF AWRPDGTLRY AENPPKKYQD IVNPDFYARD AKPALWIALR DVILFWIDAG
VRIFRVDNPH TKPFPFWEWM INDVRARHPD VIFLSEAFTR PRVMARLAKL GFSQSYTYFT
WRESKRDFTE YLTELTQTSL RDFFRPNFFV NTPDINPRHL QRQGRPGFLI RAALATMLSG
LWGVYSGFEL CEAAALPNSE EYLDSEKYQI RAWDWNRPGN IVREITELNR IRRTNPALHT
HLNLTFLPAH NDHILFFEKA TEARDNVIVV AINLDPHNEQ GADIELSWST FNRWGVHDHS
TIDVIDQMTG ERFQWQGRWQ HVRLDPGTRP FAIWRIAPAG GLPREAVPDD ADAHRAAHDT
TFNE
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