| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4348 |
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| Symbol | |
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| ID | 6245870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | + |
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| Start bp | 1375004 |
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| End bp | 1375882 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642596102 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001860509 |
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| Protein GI | 186473167 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2064] Flp pilus assembly protein TadC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGACTG TGTCGCTTGC GATCGCCGTG GGATGCGTGC TGGTGTGCAT GCTCGCGCTG
TATGCGGCGC GGCGCCTGAT GCGCAATGTG CCGAACGAAG ATCGAACATG GCTCGATGCG
TTGCCGCCGC TGCTGCGCTT CATCTGGCCC ACCGTCAATT TTGCCGCGCA TTACAGCGCT
GGATGGTTCG GCGAGCGATT CATCGCGCGT ACCGACGCGC AACTGCGTCT CACGTCGCTC
AATTTCCTGA TGAACGCGCG GCAGTTTCTG GCATTGTCGA TGGTGTCGTC ATTTGGCGCC
GCACTGATCG CATTGACTGT GATGCTCGCG AGCGGCCTGT TCTCGGCGGC CGCTCTGTGT
TTCGCGATGT GCGTCGGTTA TTTCTATCCG CGCATCTGGA TGCGCGACGT GCGACGGCGT
TACGTCGCCA CGGTGCTGCG CCAGTTGCCG ATTTATCTGG ACTTCTTGAC GCTCGCCGTC
GAAGCAGGAC TCAACGTCAA CGGCGCCATT CAAAAGGCCG TCGAAAAAGG CCCGGACGGG
CCGTTGCGAC GCGAATTCGA GCACGTGCTG CGCGATCTGA AATCAGGCTT GAAGCGTGGC
GATGCGTTGC GGCGTTTCGA CGAACGGCAG CAGATCGGCG AAGTGTCGAA CCTGGTTCGC
ACGATCGCGC AAGCGGAAAG AATGGGTTCG GGGCTCGCGA AGACGTTGCG CTTCCAGTCC
GAGCAGCGGC GCGCGGAACG CTTCCAGCGA GCAGAGAAGC AGGCGATGGA AGCCCCCGTC
AAACTGCTGT TCCCGTTGCT CGTATTCATC TTTCCGGTGA CGTTCATCGT GCTCGGCTTC
CCGATTGCGA TGAAGTTCAT GCAAGAGGGC CTGTTATGA
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| Protein sequence | MLTVSLAIAV GCVLVCMLAL YAARRLMRNV PNEDRTWLDA LPPLLRFIWP TVNFAAHYSA
GWFGERFIAR TDAQLRLTSL NFLMNARQFL ALSMVSSFGA ALIALTVMLA SGLFSAAALC
FAMCVGYFYP RIWMRDVRRR YVATVLRQLP IYLDFLTLAV EAGLNVNGAI QKAVEKGPDG
PLRREFEHVL RDLKSGLKRG DALRRFDERQ QIGEVSNLVR TIAQAERMGS GLAKTLRFQS
EQRRAERFQR AEKQAMEAPV KLLFPLLVFI FPVTFIVLGF PIAMKFMQEG LL
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