Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_4128 |
Symbol | |
ID | 6245656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010623 |
Strand | - |
Start bp | 1115687 |
End bp | 1116358 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642595888 |
Product | lytic transglycosylase catalytic |
Protein accession | YP_001860295 |
Protein GI | 186472953 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGCGGC TGGTCTGCCT GACCGTCCTC GCGTTCAGTA TTATGCAAAG CGCATGGGCC GACGACCAGA CAAAGCACGA CCGCACCTCC GATTATCTGC ACCAGAAGTT CGGCGTCGCG AAAGAGAAGG CTGAACAGAT TTCGAACGCC GTGCGAGCCG CGTCCGAAAA GTACGCGCTG CCGCCGGCGC TGATTCTTGC AATCATCTCG ATCGAATCCC GCTTCAAGGA AAAAGCCAAG GGCGGCAACG GCGCGACGGG GCTGATGCAG GTGGTGCCCG GCGCACACAG GCGCATGCTG AAAGACGTGA AGGATTTGAC CGACCCCGAG ACCAACATCG AAATCGGCTC GGCGATTCTG TACGGCTACG TCAAATCGGC GGGCGGCGAC CTGAACGCCG CGTTGAAGAG CTATGGCGGA TCGCAGGCCT ATGCGGAGAA GGTCAACGGT CGCGTGAAGA CGTTCGCGGA CGTCGTGAGC GTGGAGGCCA GCGCGGTGCC GGGCGCGGAC CAGCCGTTGC CGTCGCGCGA CGGCGGGTGC GATGCCCGCT ATACGTCGCT GTGCATCGGG GCCGTGACCT ACGTGAGTCC TGTGCCGGAG CCCGCGAGCA GCCCGAGCGT CTCGCAGCGC GCAAGCGACC TGCTGAATGC GCTGCTGCCG CTGTCGCACT GA
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Protein sequence | MRRLVCLTVL AFSIMQSAWA DDQTKHDRTS DYLHQKFGVA KEKAEQISNA VRAASEKYAL PPALILAIIS IESRFKEKAK GGNGATGLMQ VVPGAHRRML KDVKDLTDPE TNIEIGSAIL YGYVKSAGGD LNAALKSYGG SQAYAEKVNG RVKTFADVVS VEASAVPGAD QPLPSRDGGC DARYTSLCIG AVTYVSPVPE PASSPSVSQR ASDLLNALLP LSH
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