Gene Bphy_3958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_3958 
Symbol 
ID6245488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp932998 
End bp933711 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content60% 
IMG OID642595720 
Producttwo component transcriptional regulator 
Protein accessionYP_001860127 
Protein GI186472785 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCCCC AGGCCTTTCA TGCATACCGG TTACCGATGA AGCTGCTGTT GATCGAAGAC 
AATCCGACGC TGTCGCACTG GCTCGCCCGC ATGCTCGAGC AAGATGCGTT CGCGCTCGAT
ACCGTGCAGG ACGGCGAAGC CGCCGACCAG TTGCTTAGCA TGAACCGCTA CGACGTCGTG
CTGCTGGATC TGAATCTGCC GCGACTGTCG GGCAAGAACG TGCTGCGCCG TTTGCGTCAA
CGCGGCGATG CGACGCCCGT GATGATCCTC ACCGCAAGCG GCTCGATCGA CGAAAAGGTT
GAATTGCTGG GCGCGGGCGC CGACGATTAT CTGGTGAAGC CGTTCGAGGT TCGCGAACTG
ATTGCACGGG TAAAGGTGAT GATCCGGCGG CAGTCGGCAT CGACCGCAAA TGAAGTTTCG
TGCGGCGATC TCGCGTTCGA CATCGACACG CGCCAGTTCA CGCTGAAGGG CGTGCCGCTG
AACGTCACAC CGCGCGAGCG CAGCGTGCTT GAAACGCTGA TTTTGCGCAT GGGCAAGACG
GTATCGAAAG CGGCGCTGAT GGACTCGATC TTCACGCACG ACGATCAACC TAGCGAAGAC
GCGCTCGAAA TTTACGTGTC GCGGTTGCGC AAGAAACTCG ACGGCAGTTC GGCCGCGATC
GTCACGTTGC GCGGCCTCGG TTATCTGCTG CGCAAGAAGG ACGACGTCGA ATGA
 
Protein sequence
MLPQAFHAYR LPMKLLLIED NPTLSHWLAR MLEQDAFALD TVQDGEAADQ LLSMNRYDVV 
LLDLNLPRLS GKNVLRRLRQ RGDATPVMIL TASGSIDEKV ELLGAGADDY LVKPFEVREL
IARVKVMIRR QSASTANEVS CGDLAFDIDT RQFTLKGVPL NVTPRERSVL ETLILRMGKT
VSKAALMDSI FTHDDQPSED ALEIYVSRLR KKLDGSSAAI VTLRGLGYLL RKKDDVE