| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3836 |
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| Symbol | |
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| ID | 6245374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 804833 |
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| End bp | 806206 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642595606 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001860013 |
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| Protein GI | 186472671 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.395614 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.929001 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGCGCG ATAATCACCC TAAGCCGCTC TACGAGGCGC TCGAAGATCA CAGCGCAGAG
GGCGTGGCGA TCCTCACGGC GGAGCCCGTG CGTATCGCGC AGGCACTCGT GCTGGCGATG
GTCGGACTCG TCGTCGCGGG TTTGCTGTGG TCGTTCTTCG GGCGCGCGGA TGTGATCGTC
ACGGCGCAAG GCACGCTTGC GCCGGAATCG GACGTGCGGC GCATCTATGC GCCCATCGAC
GGTGAACTCA CCGACCTGTA TATCGCCGAA GGTCAGCCGG TCTCGAAGGG CGACGTGCTC
GCGCGGATCA ATGCGCGCGG CGCGATCGAA GCGGCGACCA ATGCGCTGCA GGCGCAGCTG
AAACTCGAGG ACGCCGAGCG CGAGTGGAAA GAGTTCCCGC AGAAAAAAGA ACTGATGGAA
CGCAAGGCAG CCGCGCTCAA GGATCAGCTC GAAGTGGAAG AGCGTCTGCA CGAAAACCGC
ATTTCCGAAG GCACGACGAA GCTCGCCGAA GGCCAGAAGG CGCAACTGGA AGAAGCGCGC
AGTACACTGG ACAACGCGCG CCGCGCACGC GATGCGGCGC GCCAGGAAGC GGACAAGTAC
GCGCGCCTGT TCGCGCAGCC GGGCGGCGGC GGCGTCGCCG AGTTGCAGGT GGAAGCGAAG
CGCAATACGT ATATGGAAGC GGAAAACGCC TACCGTGTCG CGCAATCGCG GCTCACCGAA
CTCGACTTCA AGCTCAGTCA CGAATACGCC GAGGCGAATG CGCAACTCGA AACGAGCGGC
CAGCAGGCCA CGACGCTCCA GCTTCAATAC GACGATCTGA TTCGCGAGAT CACCAGCACG
GAAGAGAAGC TGCGCCTGCA ATTGCAGACG GCGCGCCTCG TGGCGGAGGC AGCCGCGCGA
ATCCGTTTCG AAAACATCGA CAAGGACAAT TTTCTGCTGA TACTCGCGCC GACTTCGGGT
GTCGTCACCG ACGTCACGTC CACGCAAACG GGCGACAAGA TCCAGGCGAA CGCGCCGCTT
GGCGGCATCG CGCCGAAGGA CGCGCGCCCC GTGCTGAAGA TCGAGATTGC CGAGCGCGAC
CGCGCGTTCC TGCACGAAGG CATGACCGTC AAGCTGAAAT TCAACGCGTT TCCGTACCAG
CGCTATGGGC TGATCAACGG CACGCTCGCG TATATCTCGC CGGCAACCAA GCCGTCGGCA
CAGGACAAGC AGCCTGTCTA CGAGGGCCGC GTGCAACTCG ACAGAAATTA CTACCAGATC
GCGGAGAACC GCTATCCGTT GCGTTACGGG ATGACGGCGA GCGCCGAAAT CGTCGTACGC
GAACGGCGGT TGATCGATCT GGGGCTGGAC CCGTTCAGAC AACTGGCCGG ATAG
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| Protein sequence | MKRDNHPKPL YEALEDHSAE GVAILTAEPV RIAQALVLAM VGLVVAGLLW SFFGRADVIV
TAQGTLAPES DVRRIYAPID GELTDLYIAE GQPVSKGDVL ARINARGAIE AATNALQAQL
KLEDAEREWK EFPQKKELME RKAAALKDQL EVEERLHENR ISEGTTKLAE GQKAQLEEAR
STLDNARRAR DAARQEADKY ARLFAQPGGG GVAELQVEAK RNTYMEAENA YRVAQSRLTE
LDFKLSHEYA EANAQLETSG QQATTLQLQY DDLIREITST EEKLRLQLQT ARLVAEAAAR
IRFENIDKDN FLLILAPTSG VVTDVTSTQT GDKIQANAPL GGIAPKDARP VLKIEIAERD
RAFLHEGMTV KLKFNAFPYQ RYGLINGTLA YISPATKPSA QDKQPVYEGR VQLDRNYYQI
AENRYPLRYG MTASAEIVVR ERRLIDLGLD PFRQLAG
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